Detailed information NTG0775130

Bioinformatically predicted

Overview

• Name: med
• Type: Regulator
• Locus tag: PF977_RS16380
• Genome accession: NZ_CP116012
• Coordinates: 3103877..3104830 (-)
• Length: 317 a.a.
• NCBI ID: WP_014476425.1
• Uniprot ID: A0A0K6M9I2
• Organism: Bacillus subtilis strain SRCM124333
• Function: regulation of regulators (predicted from homology) Competence regulation

Genomic Context

Location: 3098877..3109830

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
PF977_RS16350 (PF977_16350)	appD	3098996..3099982 (-)	987	WP_003232965.1	oligopeptide ABC transporter ATP-binding protein AppD	-
PF977_RS16355 (PF977_16355)	yjaZ	3100174..3100959 (-)	786	WP_003232967.1	DUF2268 domain-containing protein	-
PF977_RS16360 (PF977_16360)	fabF	3101035..3102276 (-)	1242	WP_003244890.1	beta-ketoacyl-ACP synthase II	-
PF977_RS16365 (PF977_16365)	fabH	3102299..3103237 (-)	939	WP_003232971.1	beta-ketoacyl-ACP synthase III	-
PF977_RS16370 (PF977_16370)	yjzB	3103402..3103641 (+)	240	WP_003232972.1	spore coat protein YjzB	-
PF977_RS16375 (PF977_16375)	comZ	3103671..3103862 (-)	192	WP_003224559.1	ComG operon transcriptional repressor ComZ	Regulator
PF977_RS16380 (PF977_16380)	med	3103877..3104830 (-)	954	WP_014476425.1	transcriptional regulator Med	Regulator
PF977_RS16385 (PF977_16385)	-	3104920..3105477 (-)	558	WP_014479435.1	hypothetical protein	-
PF977_RS16390 (PF977_16390)	-	3105559..3106293 (-)	735	WP_003245223.1	hypothetical protein	-
PF977_RS16395 (PF977_16395)	yjzD	3106543..3106728 (+)	186	WP_029317607.1	YjzD family protein	-
PF977_RS16400 (PF977_16400)	yjzC	3106774..3106953 (-)	180	WP_003245356.1	YjzC family protein	-
PF977_RS16405 (PF977_16405)	argF	3107039..3107998 (-)	960	WP_003232980.1	ornithine carbamoyltransferase	-

Sequence

Protein

• Length: 317 a.a.
• Molecular weight: 35310.84 Da
• Isoelectric Point: 4.6031

>NTDB_id=775130 PF977_RS16380 WP_014476425.1 3103877..3104830(-) (med) [Bacillus subtilis strain SRCM124333]
MITRLVMIFSVLLLLSGCGQTPFKGKIEKVGMLFPDTINDLVWGTKGYKGLLNIQSKYNVDVYYKEGVKTEEDIINAIED
FHKRGVNLLYGHGSEYAEVFNLVGEDYPDMEFVISNAKAKADNVTSVHFSGEAMGFFGGMTAAHMSKTNQVGVIASFTWQ
PEVDGFIKGAKYENPDIEVNTKYTDHWDDDTTAVKLYQKMKNEGADVVYPAGDGYNVPVIQQIKKDGLYAIGYVTDQSDL
GENTVLTSTVQNVDKAYEIIAEQFNKGTLEGGDHYYDLNTGVVEMGTFSPLVDKDFQQRIAKLIKTYNKTGELPKNE

Nucleotide

• Length: 954 bp

>NTDB_id=775130 PF977_RS16380 WP_014476425.1 3103877..3104830(-) (med) [Bacillus subtilis strain SRCM124333]
TTGATCACAAGGCTTGTCATGATCTTTTCTGTCCTCCTTTTATTGAGTGGATGTGGACAAACTCCGTTCAAAGGAAAAAT
TGAGAAGGTCGGCATGCTCTTTCCTGATACGATTAATGACCTCGTATGGGGTACAAAAGGGTATAAAGGATTACTGAATA
TACAATCCAAATACAATGTGGACGTCTATTATAAAGAAGGCGTTAAAACAGAAGAAGATATCATAAATGCGATTGAGGAT
TTTCATAAGAGGGGCGTCAATCTGCTCTACGGCCATGGGAGTGAATATGCTGAGGTGTTTAACTTGGTCGGCGAAGATTA
TCCAGATATGGAATTCGTCATTTCCAATGCGAAAGCGAAAGCTGATAATGTAACAAGTGTCCATTTTAGCGGGGAAGCAA
TGGGCTTTTTTGGAGGAATGACTGCTGCCCATATGTCGAAAACGAATCAGGTCGGTGTAATTGCTTCCTTTACGTGGCAG
CCTGAGGTTGACGGTTTTATCAAAGGGGCCAAGTATGAAAATCCGGATATAGAGGTAAATACGAAATATACGGATCATTG
GGATGATGATACAACAGCAGTAAAGCTTTATCAGAAAATGAAGAACGAAGGCGCGGATGTTGTGTATCCCGCCGGAGACG
GGTATAATGTTCCTGTTATTCAGCAAATCAAAAAAGACGGTCTTTATGCCATAGGCTACGTCACAGATCAATCGGATCTG
GGCGAGAATACCGTATTAACCAGCACGGTGCAAAATGTGGACAAGGCCTATGAAATCATTGCTGAACAATTTAATAAAGG
CACCCTTGAGGGCGGCGATCATTACTACGACCTGAACACGGGAGTCGTTGAGATGGGAACATTCAGCCCGCTCGTCGACA
AAGACTTTCAGCAAAGAATCGCCAAGCTGATCAAAACATACAACAAAACAGGCGAGCTGCCAAAAAACGAGTAA

Domains

Predicted by InterproScan.

• ABC transporter substrate-binding protein PnrA-like (Bmp) (27-317)

3D structure

• AlphaFold DB: A0A0K6M9I2

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
med	Bacillus subtilis subsp. subtilis str. 168	99.685	100	0.997