Detailed information    

insolico Bioinformatically predicted

Overview

Name   comZ   Type   Regulator
Locus tag   PF977_RS16375 Genome accession   NZ_CP116012
Coordinates   3103671..3103862 (-) Length   63 a.a.
NCBI ID   WP_003224559.1    Uniprot ID   G4NWD2
Organism   Bacillus subtilis strain SRCM124333     
Function   repression of comG operon (predicted from homology)   
Competence regulation

Genomic Context

Location: 3098671..3108862
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  PF977_RS16350 (PF977_16350) appD 3098996..3099982 (-) 987 WP_003232965.1 oligopeptide ABC transporter ATP-binding protein AppD -
  PF977_RS16355 (PF977_16355) yjaZ 3100174..3100959 (-) 786 WP_003232967.1 DUF2268 domain-containing protein -
  PF977_RS16360 (PF977_16360) fabF 3101035..3102276 (-) 1242 WP_003244890.1 beta-ketoacyl-ACP synthase II -
  PF977_RS16365 (PF977_16365) fabH 3102299..3103237 (-) 939 WP_003232971.1 beta-ketoacyl-ACP synthase III -
  PF977_RS16370 (PF977_16370) yjzB 3103402..3103641 (+) 240 WP_003232972.1 spore coat protein YjzB -
  PF977_RS16375 (PF977_16375) comZ 3103671..3103862 (-) 192 WP_003224559.1 ComG operon transcriptional repressor ComZ Regulator
  PF977_RS16380 (PF977_16380) med 3103877..3104830 (-) 954 WP_014476425.1 transcriptional regulator Med Regulator
  PF977_RS16385 (PF977_16385) - 3104920..3105477 (-) 558 WP_014479435.1 hypothetical protein -
  PF977_RS16390 (PF977_16390) - 3105559..3106293 (-) 735 WP_003245223.1 hypothetical protein -
  PF977_RS16395 (PF977_16395) yjzD 3106543..3106728 (+) 186 WP_029317607.1 YjzD family protein -
  PF977_RS16400 (PF977_16400) yjzC 3106774..3106953 (-) 180 WP_003245356.1 YjzC family protein -
  PF977_RS16405 (PF977_16405) argF 3107039..3107998 (-) 960 WP_003232980.1 ornithine carbamoyltransferase -

Sequence

Protein


Download         Length: 63 a.a.        Molecular weight: 7214.27 Da        Isoelectric Point: 4.2564

>NTDB_id=775129 PF977_RS16375 WP_003224559.1 3103671..3103862(-) (comZ) [Bacillus subtilis strain SRCM124333]
MQHEKSLEFLQIAMKYLPEAKEQLEKSGIELSMEAIQPFMNLFTTVMAEAYELGKSDAKSETE

Nucleotide


Download         Length: 192 bp        

>NTDB_id=775129 PF977_RS16375 WP_003224559.1 3103671..3103862(-) (comZ) [Bacillus subtilis strain SRCM124333]
ATGCAGCACGAAAAATCACTTGAATTCTTGCAAATTGCCATGAAATATCTCCCTGAAGCGAAAGAACAGCTTGAGAAATC
AGGCATTGAGCTCTCAATGGAGGCCATCCAGCCGTTTATGAATCTATTTACAACGGTAATGGCGGAAGCTTATGAGCTTG
GCAAGTCTGACGCTAAATCTGAAACAGAATAA

Domains

Predicted by InterproScan.

ComZ (ComZ)

(4-58)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB G4NWD2

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comZ Bacillus subtilis subsp. subtilis str. 168

100

100

1