Detailed information    

insolico Bioinformatically predicted

Overview


Name   comP   Type   Regulator
Locus tag   PF975_RS04870 Genome accession   NZ_CP116010
Coordinates   976045..978396 (+) Length   783 a.a.
NCBI ID   WP_271259836.1    Uniprot ID   -
Organism   Bacillus velezensis strain SRCM123815     
Function   phosphorylation of ComA (predicted from homology)   
Competence regulation

Genomic Context


Location: 971045..983396
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  PF975_RS04840 (PF975_04840) - 971067..972533 (+) 1467 WP_014418767.1 nicotinate phosphoribosyltransferase -
  PF975_RS04845 (PF975_04845) - 972663..973886 (+) 1224 WP_014418766.1 EAL and HDOD domain-containing protein -
  PF975_RS04850 (PF975_04850) - 973893..974234 (-) 342 WP_014418765.1 hypothetical protein -
  PF975_RS04855 (PF975_04855) degQ 974700..974840 (+) 141 WP_003152043.1 degradation enzyme regulation protein DegQ Regulator
  PF975_RS04860 (PF975_04860) - 974992..975897 (+) 906 WP_014418764.1 polyprenyl synthetase family protein -
  PF975_RS04865 (PF975_04865) comX 975897..976067 (+) 171 WP_032863917.1 competence pheromone ComX -
  PF975_RS04870 (PF975_04870) comP 976045..978396 (+) 2352 WP_271259836.1 sensor histidine kinase Regulator
  PF975_RS04875 (PF975_04875) comA 978477..979121 (+) 645 WP_014418762.1 response regulator transcription factor Regulator
  PF975_RS04880 (PF975_04880) - 979143..979526 (+) 384 WP_014418761.1 hotdog fold thioesterase -
  PF975_RS04885 (PF975_04885) mnhG 979566..979940 (-) 375 WP_003152056.1 monovalent cation/H(+) antiporter subunit G -
  PF975_RS04890 (PF975_04890) - 979924..980208 (-) 285 WP_012118311.1 Na(+)/H(+) antiporter subunit F1 -
  PF975_RS04895 (PF975_04895) - 980208..980684 (-) 477 WP_022553708.1 Na+/H+ antiporter subunit E -
  PF975_RS04900 (PF975_04900) - 980690..982171 (-) 1482 WP_021495363.1 Na+/H+ antiporter subunit D -
  PF975_RS04905 (PF975_04905) - 982164..982505 (-) 342 WP_003152063.1 Na(+)/H(+) antiporter subunit C -
  PF975_RS04910 (PF975_04910) - 982505..982936 (-) 432 WP_007613424.1 Na(+)/H(+) antiporter subunit B -

Sequence


Protein


Download         Length: 783 a.a.        Molecular weight: 90733.97 Da        Isoelectric Point: 9.0674

>NTDB_id=774941 PF975_RS04870 WP_271259836.1 976045..978396(+) (comP) [Bacillus velezensis strain SRCM123815]
MTQLGLLKKQESCGSLRQLLKCFTVALLLFGIFYFTFIIYYTQNGILIGTKVVQSSNQELKVVDISKSSYGRIMGLKIGD
RITEINGGKPKKENIYGSYLAKIKYLKVERDGRLIELKNIEFIYLDSPYSFFSYIIPCIFFLLSLICIFYIFKVNLRKDS
VSAYILICFLLCISIAYLSAGGVTRGYRINRYINLYTFLAVPVLYLNFLHQYFKELKVKFSRGIYVGLLYLLPLINILLE
LFRDRIGHHLIVSLNLLTFLLEMIVVYVSLILYQIKHRKKDFSYLLKVLLVSNTIAFLPFSLLYIAPLIIFGQYVYSAVV
TAPFLLLIPLALVYQFVVNKIYNIDFLLGRLRYYCLLAVIPTIGIVWVFVVFINKNKNFDTFQITLFVFLIMLAVFYFKE
VLDFKFRLKRFSEKYNYQDSIFKYTQLLKSVSALNQVFMNLKKTILDVLPVSKAYIFEINSDGDILYFDKQNSEPNWQPY
KKEFDKVTSEIGKIIEVNQGFLMKIGERGANSYVLLCLSSINTPRLTRDEISWLKTLSFYTSVSMENILQIEELMNHLQD
LKQQGSNPVWLKKLMFTIEEKQRSDLARDLHDSVLQDLISLKRQCELFLADFKKEEPCQLEVQDKLHQMNEQMSDVILMT
RETCHELRPQLLYDLGLVKAVSKLAAQQQERAPFHIRLNTGRFTAALDLDTQLNLYRIIQEFLSNAMKHSQANEVLIMLI
SIQNKVILHYEDDGVGCNQEEGGGQSMSMGLSGIKERVRALDGRMKIDTSEGNGFKADIEMEL

Nucleotide


Download         Length: 2352 bp        

>NTDB_id=774941 PF975_RS04870 WP_271259836.1 976045..978396(+) (comP) [Bacillus velezensis strain SRCM123815]
ATGACCCAGCTTGGTTTACTTAAAAAACAAGAGAGTTGTGGTTCCTTGAGACAATTGCTGAAATGTTTTACGGTTGCTTT
ATTATTGTTCGGAATTTTTTATTTTACTTTTATAATTTATTATACTCAGAATGGAATATTAATAGGAACAAAAGTAGTTC
AGTCTTCTAACCAAGAATTAAAAGTTGTGGATATTTCAAAATCTTCTTATGGAAGAATAATGGGTCTAAAAATTGGGGAC
AGAATTACTGAAATAAATGGCGGAAAACCTAAAAAAGAAAATATTTATGGTTCATACCTTGCGAAAATTAAGTATTTAAA
AGTTGAGAGAGACGGGCGTTTAATAGAACTTAAAAATATTGAATTCATTTATTTAGATAGTCCATATAGTTTCTTTTCGT
ATATTATTCCGTGTATCTTTTTTCTTCTTAGTTTAATATGCATATTTTATATATTTAAAGTCAACCTAAGAAAAGATAGC
GTCTCAGCGTATATTCTTATTTGCTTTTTACTGTGTATTTCTATTGCATACTTAAGCGCAGGAGGGGTTACAAGAGGTTA
TCGTATTAATAGGTACATTAATCTTTACACCTTTTTAGCTGTGCCTGTTTTATATCTAAATTTCTTGCATCAATATTTCA
AAGAACTTAAAGTGAAATTTTCGAGAGGAATTTACGTTGGTTTATTGTACCTTCTTCCTCTAATTAATATCCTGCTTGAA
TTATTTAGAGATAGAATAGGTCATCATTTAATTGTAAGCCTTAACCTTTTAACATTTTTATTAGAAATGATTGTAGTTTA
TGTTAGTCTCATATTATATCAAATAAAACATAGAAAAAAGGATTTCTCTTACCTGTTAAAAGTACTTCTGGTTTCTAATA
CAATTGCTTTTTTACCCTTTTCTTTATTATATATTGCTCCATTGATTATTTTTGGACAATATGTATATAGCGCTGTAGTT
ACTGCACCTTTTCTTCTGCTCATACCTTTAGCATTGGTATATCAATTTGTCGTAAATAAGATTTACAACATTGATTTCTT
GTTAGGCCGTTTGAGGTATTATTGCTTGTTAGCAGTTATTCCGACGATAGGAATCGTTTGGGTATTTGTAGTATTCATCA
ACAAAAATAAAAATTTTGACACTTTCCAAATTACATTGTTTGTATTTCTAATCATGCTAGCCGTTTTTTATTTCAAAGAA
GTTCTAGACTTTAAGTTTCGCTTAAAGCGTTTCTCTGAAAAATACAATTACCAAGACAGCATATTTAAATATACACAGCT
TCTTAAAAGCGTATCAGCTTTAAATCAAGTGTTTATGAATTTGAAAAAGACTATTTTGGACGTCTTGCCTGTTAGTAAAG
CTTATATATTTGAAATCAATTCTGACGGAGACATTCTGTATTTTGATAAACAGAACAGTGAACCGAACTGGCAGCCGTAT
AAAAAAGAATTTGATAAAGTCACATCAGAGATTGGCAAGATTATTGAAGTAAATCAAGGTTTTCTGATGAAGATTGGAGA
AAGAGGGGCAAACTCATACGTTCTGCTTTGTTTGTCGAGCATTAATACTCCAAGACTGACAAGAGATGAGATATCTTGGT
TAAAGACATTGTCTTTTTATACAAGTGTTTCGATGGAAAACATATTGCAGATCGAAGAACTCATGAACCATTTACAAGAT
CTAAAGCAACAAGGCTCAAACCCGGTCTGGCTCAAAAAGCTGATGTTTACGATCGAGGAAAAGCAGCGTTCGGATTTGGC
CCGTGATCTGCATGATTCAGTGCTGCAGGACTTGATTTCTTTGAAGCGCCAGTGTGAGCTGTTTCTGGCCGATTTTAAGA
AAGAGGAGCCTTGCCAGTTAGAGGTGCAGGACAAGCTTCATCAGATGAATGAGCAGATGTCGGATGTCATTTTGATGACC
CGGGAGACGTGCCATGAGCTTCGTCCTCAGCTGCTGTATGATTTGGGTCTGGTCAAGGCGGTATCCAAGCTTGCCGCGCA
GCAGCAGGAGCGTGCGCCATTTCATATCCGTCTGAATACGGGCCGGTTTACGGCGGCGCTGGATTTGGATACACAGCTGA
ATTTGTACCGCATCATTCAGGAATTTCTTTCGAACGCCATGAAGCATTCACAGGCGAATGAGGTGCTGATTATGCTGATC
AGCATTCAAAATAAAGTGATTCTGCATTATGAAGACGACGGTGTCGGATGCAATCAGGAAGAAGGCGGCGGGCAGTCGAT
GAGCATGGGTCTTTCGGGTATTAAGGAGCGTGTCCGGGCGCTTGACGGACGGATGAAAATCGACACAAGTGAAGGAAACG
GTTTTAAAGCGGATATTGAAATGGAATTGTAA

Domains


Predicted by InterproScan.

(583-652)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comP Bacillus subtilis subsp. subtilis str. 168

61.219

98.467

0.603