Detailed information NTG0774614

Bioinformatically predicted

Overview

• Name: pilA
• Type: Machinery gene
• Locus tag: PG908_RS01960
• Genome accession: NZ_CP115957
• Coordinates: 415226..416365 (-)
• Length: 379 a.a.
• NCBI ID: WP_028860160.1
• Uniprot ID: -
• Organism: Ralstonia pseudosolanacearum strain PSS4
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 410226..421365

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
PG908_RS01935	-	410926..412188 (-)	1263	WP_011000344.1	CmpA/NrtA family ABC transporter substrate-binding protein	-
PG908_RS01940	-	412465..413091 (-)	627	WP_038938076.1	ANTAR domain-containing response regulator	-
PG908_RS01945	-	413239..413940 (+)	702	WP_011000346.1	fumarylacetoacetate hydrolase family protein	-
PG908_RS01950	maiA	413944..414594 (+)	651	WP_011000347.1	maleylacetoacetate isomerase	-
PG908_RS01955	-	414591..415229 (+)	639	WP_011000348.1	LysE/ArgO family amino acid transporter	-
PG908_RS01960	pilA	415226..416365 (-)	1140	WP_028860160.1	signal recognition particle-docking protein FtsY	Machinery gene
PG908_RS01965	-	416426..417931 (+)	1506	WP_011000350.1	M16 family metallopeptidase	-
PG908_RS01970	-	417931..419274 (+)	1344	WP_011000351.1	M16 family metallopeptidase	-
PG908_RS01975	rsmD	419355..420002 (+)	648	WP_011000352.1	16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	-
PG908_RS01980	coaD	420198..420704 (+)	507	WP_003262550.1	pantetheine-phosphate adenylyltransferase	-
PG908_RS01985	-	420755..421003 (+)	249	WP_011000353.1	YfhL family 4Fe-4S dicluster ferredoxin	-

Sequence

Protein

• Length: 379 a.a.
• Molecular weight: 40141.37 Da
• Isoelectric Point: 5.8101

>NTDB_id=774614 PG908_RS01960 WP_028860160.1 415226..416365(-) (pilA) [Ralstonia pseudosolanacearum strain PSS4]
MFSFWKKRKAEPQPAAEPAPPAAAPEAAQAPAPAPAPVAAPVPTPAPAPVAVPDTPAAPAALDMQADDIETVPTPPVVEQ
ARKGWMSRLRSGLSKTSKSLTTLFVGVKVDEALFEELETALLMADAGVDATEYLLDELRRRVKAQRIETAEGVKTALRDL
LIELLHPLEKTMVLGRDQPTVIMIAGVNGAGKTTSIGKLCKHFQTYGQSVLLAAGDTFRAAAREQLVIWGQRNNVTVVAQ
ESGDPAAVIFDAVNAARARGIDIVMADTAGRLPTQLHLMEELKKVRRVIGKAMATAPHETLLVIDANTGQNALAQVKAFD
DALGLTGLIVTKLDGTAKGGILAAIARQRPVPVYFIGVGEQVEDLQPFSAREFADALLG

Nucleotide

• Length: 1140 bp

>NTDB_id=774614 PG908_RS01960 WP_028860160.1 415226..416365(-) (pilA) [Ralstonia pseudosolanacearum strain PSS4]
ATGTTTAGTTTCTGGAAGAAGCGCAAGGCAGAGCCCCAGCCGGCTGCCGAACCGGCGCCGCCCGCCGCCGCGCCCGAAGC
CGCACAGGCTCCTGCTCCTGCCCCGGCCCCGGTTGCCGCCCCCGTCCCCACGCCGGCTCCCGCCCCGGTCGCCGTGCCGG
ATACGCCGGCCGCGCCGGCTGCGCTGGACATGCAGGCCGATGACATCGAGACCGTGCCGACGCCGCCCGTGGTGGAGCAG
GCGCGCAAGGGCTGGATGTCGCGCCTGCGCTCGGGCCTGTCGAAGACCAGCAAGAGCCTGACCACGCTGTTCGTCGGCGT
GAAGGTGGACGAGGCGCTGTTCGAGGAGCTGGAGACCGCGCTGCTGATGGCCGATGCCGGCGTCGATGCCACCGAGTACC
TGCTGGACGAACTGCGCCGCCGCGTGAAGGCCCAGCGCATCGAGACCGCCGAGGGCGTGAAGACCGCGCTGCGCGACCTG
CTCATCGAGCTGCTGCATCCGCTCGAAAAGACCATGGTGCTCGGCCGCGACCAGCCGACGGTGATCATGATCGCGGGCGT
CAACGGCGCCGGCAAGACCACCAGCATCGGCAAGCTGTGCAAGCACTTCCAGACCTATGGACAGTCCGTGCTGCTGGCCG
CCGGCGACACCTTCCGCGCCGCCGCGCGCGAGCAGCTGGTGATCTGGGGCCAGCGCAACAACGTGACCGTGGTGGCGCAG
GAATCGGGCGACCCGGCCGCCGTGATCTTCGACGCGGTGAACGCGGCGCGCGCCCGCGGCATCGACATCGTCATGGCCGA
CACCGCCGGCCGCCTTCCGACCCAGCTGCACCTGATGGAAGAGCTGAAGAAGGTGCGCCGCGTGATCGGCAAAGCGATGG
CGACCGCGCCGCACGAGACCCTGCTGGTGATCGACGCCAACACCGGCCAGAACGCGCTGGCGCAGGTGAAAGCCTTCGAC
GATGCGCTCGGCCTGACCGGCCTGATCGTCACCAAGCTGGACGGCACCGCCAAGGGCGGCATCCTGGCCGCCATCGCGCG
GCAGCGGCCGGTGCCGGTATATTTCATCGGCGTGGGCGAGCAGGTGGAAGACCTGCAGCCGTTCTCCGCGCGCGAATTCG
CCGACGCGCTGCTGGGCTAA

Domains

Predicted by InterproScan.

• SRP54-type protein, GTPase domain (SRP54) (179-379)

• SRP54-type protein, helical bundle domain (SRP54_N) (98-159)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilA	Neisseria gonorrhoeae MS11	52.163	100	0.573