Detailed information    

insolico Bioinformatically predicted

Overview

Name   dsbA1   Type   Machinery gene
Locus tag   OK783_RS08750 Genome accession   NZ_CP115654
Coordinates   1678332..1679036 (-) Length   234 a.a.
NCBI ID   WP_010951331.1    Uniprot ID   Q5F649
Organism   Neisseria gonorrhoeae strain FA1090 N-1-60     
Function   DNA binding and uptake; interact with PilQ (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 1673332..1684036
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  OK783_RS08735 (OK783_08735) - 1673693..1674694 (-) 1002 WP_003691902.1 peptidylprolyl isomerase -
  OK783_RS08740 (OK783_08740) - 1674796..1677201 (-) 2406 WP_003698952.1 LPS-assembly protein LptD -
  OK783_RS08745 (OK783_08745) amgK 1677271..1678275 (+) 1005 WP_003689901.1 N-acetylmuramate/N-acetylglucosamine kinase AmgK -
  OK783_RS08750 (OK783_08750) dsbA1 1678332..1679036 (-) 705 WP_010951331.1 thiol:disulfide interchange protein DsbA/DsbL Machinery gene
  OK783_RS08755 (OK783_08755) murJ 1679474..1681012 (+) 1539 WP_003689904.1 murein biosynthesis integral membrane protein MurJ -
  OK783_RS08760 (OK783_08760) - 1681145..1682104 (+) 960 WP_003705245.1 YheT family hydrolase -
  OK783_RS08765 (OK783_08765) trpC 1682155..1682937 (+) 783 WP_003694229.1 indole-3-glycerol phosphate synthase TrpC -

Sequence

Protein


Download         Length: 234 a.a.        Molecular weight: 25420.13 Da        Isoelectric Point: 5.6758

>NTDB_id=773289 OK783_RS08750 WP_010951331.1 1678332..1679036(-) (dsbA1) [Neisseria gonorrhoeae strain FA1090 N-1-60]
MKSRHLALALGVAALFALAACDSKVQTSVPADSAPAASAAAAPAGLVEGQNYTVLANPIPQQQAGKVEVLEFFGYFCPHC
ARLEPVLSKHAKSFKDDMYLRTEHVVWQKEMLPLARLAAAVDMAAAESKDVANSHIFDAMVNQKIKLQEPEVLKKWLGEQ
TAFDGKKVLAAYESPESQARAGKMQELTETFQIDGTPTVIVGGKYKVEFADWESGMNTIDLLADKVREEQKAAQ

Nucleotide


Download         Length: 705 bp        

>NTDB_id=773289 OK783_RS08750 WP_010951331.1 1678332..1679036(-) (dsbA1) [Neisseria gonorrhoeae strain FA1090 N-1-60]
ATGAAATCCAGACACCTCGCCCTCGCCCTCGGCGTTGCCGCCCTGTTCGCCCTTGCCGCGTGCGACAGCAAAGTCCAAAC
CAGCGTCCCCGCCGACAGCGCGCCTGCCGCTTCGGCAGCCGCCGCCCCGGCAGGACTGGTCGAAGGGCAAAACTACACCG
TCCTTGCCAACCCGATTCCCCAACAGCAGGCAGGCAAGGTTGAAGTGCTTGAGTTTTTCGGCTATTTTTGTCCGCACTGC
GCCCGCCTCGAACCTGTTTTGAGCAAACACGCCAAGTCTTTTAAAGACGATATGTACCTGCGTACCGAACACGTCGTCTG
GCAGAAAGAAATGCTGCCGCTGGCACGCCTCGCCGCCGCCGTCGATATGGCTGCCGCCGAAAGCAAAGATGTGGCGAACA
GCCATATTTTCGATGCGATGGTCAACCAAAAAATCAAGCTGCAAGAGCCGGAAGTCCTCAAAAAATGGCTGGGCGAACAA
ACCGCCTTTGACGGCAAAAAAGTCCTTGCCGCCTACGAATCCCCCGAAAGTCAGGCGCGCGCCGGCAAAATGCAGGAGCT
GACCGAAACCTTCCAAATCGACGGTACGCCCACGGTTATCGTCGGCGGCAAATATAAAGTCGAATTTGCCGACTGGGAGT
CCGGTATGAACACCATCGACCTTTTGGCGGACAAAGTACGTGAAGAACAAAAAGCCGCGCAGTAG

Domains

Predicted by InterproScan.

Thioredoxin (Thioredoxin_4)

(65-214)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB Q5F649

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  dsbA1 Neisseria meningitidis MC58

97.009

100

0.97
  dsbA2 Neisseria meningitidis MC58

76.19

80.769

0.615