Detailed information
Bioinformatically predicted
Overview
| Name | xcpV | Type | Machinery gene |
| Locus tag | H7R41_RS09505 | Genome accession | NZ_AP022238 |
| Coordinates | 2026963..2027343 (-) | Length | 126 a.a. |
| NCBI ID | WP_000836915.1 | Uniprot ID | - |
| Organism | Acinetobacter baumannii strain WP8-W18-ESBL-11 | ||
| Function | pseudopilus assembly (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 2021963..2032343
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| H7R41_RS09475 (WP8W18E11_18540) | tadA | 2022082..2022585 (-) | 504 | WP_000033177.1 | tRNA adenosine(34) deaminase TadA | - |
| H7R41_RS09480 (WP8W18E11_18550) | - | 2022592..2023716 (-) | 1125 | WP_000982062.1 | enoyl-CoA hydratase/isomerase family protein | - |
| H7R41_RS09485 (WP8W18E11_18560) | ung | 2023713..2024426 (-) | 714 | WP_001177528.1 | uracil-DNA glycosylase | - |
| H7R41_RS09490 (WP8W18E11_18570) | - | 2024477..2025073 (-) | 597 | WP_000908453.1 | 6-carboxytetrahydropterin synthase | - |
| H7R41_RS09495 (WP8W18E11_18580) | gspK | 2025303..2026262 (-) | 960 | WP_000301478.1 | type II secretion system minor pseudopilin GspK | - |
| H7R41_RS09500 (WP8W18E11_18590) | xcpW | 2026262..2026963 (-) | 702 | WP_000594584.1 | type II secretion system minor pseudopilin GspJ | Machinery gene |
| H7R41_RS09505 (WP8W18E11_18600) | xcpV | 2026963..2027343 (-) | 381 | WP_000836915.1 | type II secretion system minor pseudopilin GspI | Machinery gene |
| H7R41_RS09510 (WP8W18E11_18610) | - | 2027333..2027887 (-) | 555 | WP_000841373.1 | type II secretion system protein | - |
| H7R41_RS09515 (WP8W18E11_18620) | - | 2027897..2028505 (-) | 609 | WP_000375838.1 | TetR/AcrR family transcriptional regulator | - |
| H7R41_RS09520 (WP8W18E11_18630) | - | 2028543..2029316 (-) | 774 | WP_000497298.1 | TatD family hydrolase | - |
| H7R41_RS09525 (WP8W18E11_18640) | - | 2029334..2029675 (-) | 342 | WP_001183025.1 | PilZ domain-containing protein | - |
| H7R41_RS09530 (WP8W18E11_18650) | - | 2029687..2030667 (-) | 981 | WP_001075412.1 | DNA polymerase III subunit delta' | - |
| H7R41_RS09535 (WP8W18E11_18660) | kdsB | 2030679..2031440 (-) | 762 | WP_000680696.1 | 3-deoxy-manno-octulosonate cytidylyltransferase | - |
Sequence
Protein
Download Length: 126 a.a. Molecular weight: 13957.17 Da Isoelectric Point: 9.8004
>NTDB_id=77307 H7R41_RS09505 WP_000836915.1 2026963..2027343(-) (xcpV) [Acinetobacter baumannii strain WP8-W18-ESBL-11]
MKSKGFTLLEVMVALAIFAVAAVALTKVATQYTQSTSNAILRTKAQFVAMNEVAMMEINQEWLQGTQSKQVTSQGEIWQI
DKSAQSTISPNVQKIDLQVSLYDPDKGKVQNGITHMVFFNYPVKAK
MKSKGFTLLEVMVALAIFAVAAVALTKVATQYTQSTSNAILRTKAQFVAMNEVAMMEINQEWLQGTQSKQVTSQGEIWQI
DKSAQSTISPNVQKIDLQVSLYDPDKGKVQNGITHMVFFNYPVKAK
Nucleotide
Download Length: 381 bp
>NTDB_id=77307 H7R41_RS09505 WP_000836915.1 2026963..2027343(-) (xcpV) [Acinetobacter baumannii strain WP8-W18-ESBL-11]
ATGAAATCTAAAGGCTTTACCCTCTTAGAAGTTATGGTTGCTTTGGCAATCTTTGCAGTCGCAGCTGTCGCTTTAACTAA
AGTGGCAACGCAGTACACGCAGTCCACTTCAAATGCAATTTTGCGAACCAAAGCTCAGTTTGTGGCAATGAATGAAGTTG
CTATGATGGAGATTAATCAAGAATGGTTGCAAGGAACTCAAAGTAAGCAGGTAACTTCCCAAGGTGAAATTTGGCAAATT
GATAAGTCAGCTCAATCTACAATTAGCCCAAATGTTCAAAAAATTGATTTACAAGTGAGTTTGTATGATCCGGATAAGGG
AAAAGTACAAAATGGCATTACTCATATGGTTTTTTTTAATTATCCAGTGAAAGCAAAATAA
ATGAAATCTAAAGGCTTTACCCTCTTAGAAGTTATGGTTGCTTTGGCAATCTTTGCAGTCGCAGCTGTCGCTTTAACTAA
AGTGGCAACGCAGTACACGCAGTCCACTTCAAATGCAATTTTGCGAACCAAAGCTCAGTTTGTGGCAATGAATGAAGTTG
CTATGATGGAGATTAATCAAGAATGGTTGCAAGGAACTCAAAGTAAGCAGGTAACTTCCCAAGGTGAAATTTGGCAAATT
GATAAGTCAGCTCAATCTACAATTAGCCCAAATGTTCAAAAAATTGATTTACAAGTGAGTTTGTATGATCCGGATAAGGG
AAAAGTACAAAATGGCATTACTCATATGGTTTTTTTTAATTATCCAGTGAAAGCAAAATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| xcpV | Acinetobacter baumannii D1279779 |
98.413 |
100 |
0.984 |