Detailed information NTG0077306

Bioinformatically predicted

Overview

• Name: xcpW
• Type: Machinery gene
• Locus tag: H7R41_RS09500
• Genome accession: NZ_AP022238
• Coordinates: 2026262..2026963 (-)
• Length: 233 a.a.
• NCBI ID: WP_000594584.1
• Uniprot ID: -
• Organism: Acinetobacter baumannii strain WP8-W18-ESBL-11
• Function: pseudopilus assembly (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2021262..2031963

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
H7R41_RS09470 (WP8W18E11_18530)	-	2021569..2022012 (-)	444	WP_001246675.1	SRPBCC family protein	-
H7R41_RS09475 (WP8W18E11_18540)	tadA	2022082..2022585 (-)	504	WP_000033177.1	tRNA adenosine(34) deaminase TadA	-
H7R41_RS09480 (WP8W18E11_18550)	-	2022592..2023716 (-)	1125	WP_000982062.1	enoyl-CoA hydratase/isomerase family protein	-
H7R41_RS09485 (WP8W18E11_18560)	ung	2023713..2024426 (-)	714	WP_001177528.1	uracil-DNA glycosylase	-
H7R41_RS09490 (WP8W18E11_18570)	-	2024477..2025073 (-)	597	WP_000908453.1	6-carboxytetrahydropterin synthase	-
H7R41_RS09495 (WP8W18E11_18580)	gspK	2025303..2026262 (-)	960	WP_000301478.1	type II secretion system minor pseudopilin GspK	-
H7R41_RS09500 (WP8W18E11_18590)	xcpW	2026262..2026963 (-)	702	WP_000594584.1	type II secretion system minor pseudopilin GspJ	Machinery gene
H7R41_RS09505 (WP8W18E11_18600)	xcpV	2026963..2027343 (-)	381	WP_000836915.1	type II secretion system minor pseudopilin GspI	Machinery gene
H7R41_RS09510 (WP8W18E11_18610)	-	2027333..2027887 (-)	555	WP_000841373.1	type II secretion system protein	-
H7R41_RS09515 (WP8W18E11_18620)	-	2027897..2028505 (-)	609	WP_000375838.1	TetR/AcrR family transcriptional regulator	-
H7R41_RS09520 (WP8W18E11_18630)	-	2028543..2029316 (-)	774	WP_000497298.1	TatD family hydrolase	-
H7R41_RS09525 (WP8W18E11_18640)	-	2029334..2029675 (-)	342	WP_001183025.1	PilZ domain-containing protein	-
H7R41_RS09530 (WP8W18E11_18650)	-	2029687..2030667 (-)	981	WP_001075412.1	DNA polymerase III subunit delta'	-
H7R41_RS09535 (WP8W18E11_18660)	kdsB	2030679..2031440 (-)	762	WP_000680696.1	3-deoxy-manno-octulosonate cytidylyltransferase	-

Sequence

Protein

• Length: 233 a.a.
• Molecular weight: 26622.59 Da
• Isoelectric Point: 9.5501

>NTDB_id=77306 H7R41_RS09500 WP_000594584.1 2026262..2026963(-) (xcpW) [Acinetobacter baumannii strain WP8-W18-ESBL-11]
MIKNKYIHIRSIASRLAARSSSARLTRASGFTLVELLVAIAIFAVLSLLGWKIFDYLLKVRDRNAEHEVHLFELQDAYQQ
ILRDTLQIIPLSANQGGQLHPALEIDNQILRFSKAGVTDPLKQGLSPFERIEYRYDADQKKLYRLKYTNLNTSNREQPLS
STLLNQVDQYQIMVLTPQEVTKWPEVNIDPTKPNELKKLPKGIKIQLTVAGVNYEWIYSLNQGDLSLSQEGNS

Nucleotide

• Length: 702 bp

>NTDB_id=77306 H7R41_RS09500 WP_000594584.1 2026262..2026963(-) (xcpW) [Acinetobacter baumannii strain WP8-W18-ESBL-11]
ATGATAAAAAATAAATATATTCATATCCGAAGCATTGCTTCTCGTCTTGCGGCGCGATCGAGCAGTGCTCGATTAACTCG
CGCCTCAGGATTTACTTTGGTTGAATTGTTAGTCGCGATCGCTATCTTTGCGGTTTTATCTTTATTGGGGTGGAAAATTT
TCGATTACTTGCTCAAAGTTCGTGATCGTAATGCCGAACATGAAGTGCATTTATTTGAATTACAAGATGCTTATCAACAA
ATTCTTCGTGATACTTTGCAGATTATCCCTTTATCCGCAAACCAAGGTGGTCAACTTCATCCAGCTTTAGAAATCGATAA
TCAAATTTTACGTTTTAGCAAAGCAGGCGTAACGGATCCTTTAAAACAAGGCTTATCACCATTTGAACGAATTGAATATC
GTTATGATGCAGACCAAAAAAAGTTATATCGTCTTAAATATACAAATTTGAATACTTCGAACAGAGAGCAACCTTTATCG
AGTACTTTGTTAAATCAAGTCGACCAATATCAGATTATGGTTTTGACTCCGCAAGAAGTCACAAAATGGCCCGAGGTTAA
TATTGATCCAACGAAACCTAATGAGTTAAAAAAATTACCGAAAGGGATAAAAATCCAACTTACAGTCGCTGGTGTAAATT
ATGAGTGGATTTATAGCTTAAATCAGGGTGACTTATCGCTTTCGCAGGAAGGTAATTCATAA

Domains

Predicted by InterproScan.

• Prokaryotic N-terminal methylation motif (N_methyl) (27-49)

• Type II secretion system (T2SS), protein J (T2SSJ) (83-212)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
xcpW	Acinetobacter baumannii D1279779	99.571	100	0.996