Detailed information    

insolico Bioinformatically predicted

Overview

Name   recR   Type   Machinery gene
Locus tag   QRA12_RS05785 Genome accession   NZ_CP127345
Coordinates   1201093..1201689 (+) Length   198 a.a.
NCBI ID   WP_000559158.1    Uniprot ID   A0A2K4AK09
Organism   Staphylococcus aureus strain MRSA11     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context

Location: 1196093..1206689
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QRA12_RS05755 (QRA12_05750) treR 1197021..1197749 (+) 729 WP_406707346.1 trehalose operon repressor -
  QRA12_RS05765 (QRA12_05760) - 1198150..1198247 (+) 98 Protein_1134 hypothetical protein -
  QRA12_RS05770 (QRA12_05765) - 1198389..1198913 (+) 525 WP_406707347.1 GNAT family N-acetyltransferase -
  QRA12_RS05775 (QRA12_05770) dnaX 1198982..1200679 (+) 1698 WP_001109051.1 DNA polymerase III subunit gamma/tau -
  QRA12_RS05780 (QRA12_05775) - 1200769..1201086 (+) 318 WP_001213992.1 YbaB/EbfC family nucleoid-associated protein -
  QRA12_RS05785 (QRA12_05780) recR 1201093..1201689 (+) 597 WP_000559158.1 recombination mediator RecR Machinery gene
  QRA12_RS05790 (QRA12_05785) - 1201765..1201929 (+) 165 WP_153090512.1 hypothetical protein -
  QRA12_RS05795 (QRA12_05790) - 1201917..1201985 (+) 69 WP_370458382.1 hypothetical protein -

Sequence

Protein


Download         Length: 198 a.a.        Molecular weight: 22099.51 Da        Isoelectric Point: 4.7564

>NTDB_id=772475 QRA12_RS05785 WP_000559158.1 1201093..1201689(+) (recR) [Staphylococcus aureus strain MRSA11]
MHYPEPISKLIDSFMKLPGIGPKTAQRLAFHTLDMKEDDVVQFAKALVDVKRELTYCSVCGHITENDPCYICEDKQRDRS
VICVVEDDKDVIAMEKMREYKGLYHVLHGSISPMDGIGPEDINIPSLIERLKSDEVNELILAMNPNLEGESTAMYISRLV
KPIGIKVTRLAQGLSVGGDLEYADEVTLSKAIAGRTEM

Nucleotide


Download         Length: 597 bp        

>NTDB_id=772475 QRA12_RS05785 WP_000559158.1 1201093..1201689(+) (recR) [Staphylococcus aureus strain MRSA11]
ATGCATTATCCAGAACCTATATCAAAGCTTATTGATAGCTTTATGAAATTGCCAGGCATTGGTCCAAAGACAGCCCAACG
TCTGGCTTTTCATACCTTAGATATGAAAGAAGACGATGTTGTTCAGTTTGCCAAAGCATTAGTAGATGTTAAAAGAGAAT
TAACATATTGTAGCGTATGTGGTCACATTACTGAAAATGATCCATGTTATATTTGTGAAGATAAGCAAAGAGATCGTTCA
GTTATTTGTGTTGTGGAAGATGACAAAGATGTTATCGCAATGGAAAAAATGAGAGAGTATAAAGGTTTATATCATGTATT
ACATGGTTCTATTTCTCCTATGGATGGGATTGGACCAGAAGACATTAATATTCCTTCATTAATTGAACGCTTGAAAAGTG
ATGAAGTTAATGAGCTCATTTTAGCTATGAACCCTAATTTAGAAGGGGAATCGACAGCGATGTATATTTCTAGATTAGTT
AAACCTATAGGTATTAAAGTAACAAGATTAGCACAAGGATTATCTGTAGGTGGAGATTTGGAATACGCAGATGAAGTAAC
ACTATCTAAGGCGATTGCTGGTAGAACAGAAATGTAA

Domains

Predicted by InterProScan.

RecR protein (RecR_ZnF)

(40-78)

Toprim domain (Toprim_4)

(80-171)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A2K4AK09

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recR Bacillus subtilis subsp. subtilis str. 168

77.273

100

0.773
  recR Streptococcus pneumoniae R6

63.636

100

0.636
  recR Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539

48.205

98.485

0.475