Detailed information    

insolico Bioinformatically predicted

Overview

Name   braR   Type   Regulator
Locus tag   PDI54_RS13600 Genome accession   NZ_CP115472
Coordinates   2731984..2732649 (-) Length   221 a.a.
NCBI ID   WP_000697877.1    Uniprot ID   A0A0D1JN68
Organism   Staphylococcus aureus strain AF4001     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 2726984..2737649
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  PDI54_RS13580 (PDI54_13580) - 2727454..2727567 (-) 114 Protein_2640 hypothetical protein -
  PDI54_RS13585 (PDI54_13585) - 2728226..2730226 (-) 2001 WP_000776750.1 ABC transporter permease -
  PDI54_RS13590 (PDI54_13590) - 2730223..2730978 (-) 756 WP_000923760.1 ABC transporter ATP-binding protein -
  PDI54_RS13595 (PDI54_13595) braS 2731086..2731973 (-) 888 WP_000143425.1 nisin susceptibility-associated two-component system sensor histidine kinase NsaS Regulator
  PDI54_RS13600 (PDI54_13600) braR 2731984..2732649 (-) 666 WP_000697877.1 nisin susceptibility-associated two-component system response regulator NsaR Regulator
  PDI54_RS13605 (PDI54_13605) - 2732675..2732875 (-) 201 WP_000604730.1 hypothetical protein -
  PDI54_RS13610 (PDI54_13610) - 2733073..2734497 (+) 1425 WP_000953755.1 alkaline phosphatase -
  PDI54_RS14080 - 2734557..2734658 (-) 102 WP_000731976.1 SE2200 family small protein -
  PDI54_RS13620 (PDI54_13620) - 2734780..2735235 (-) 456 WP_000106185.1 MarR family winged helix-turn-helix transcriptional regulator -
  PDI54_RS13625 (PDI54_13625) - 2735480..2736241 (-) 762 WP_000323441.1 alpha/beta hydrolase family protein -

Sequence

Protein


Download         Length: 221 a.a.        Molecular weight: 25415.49 Da        Isoelectric Point: 4.7961

>NTDB_id=772244 PDI54_RS13600 WP_000697877.1 2731984..2732649(-) (braR) [Staphylococcus aureus strain AF4001]
MKILIVEDDFVIAESLASELKKWNYGVIVVEQFDDILSIFNQHQPQLVLLDINLPTLNGFHWCQEIRKTSNVPIIFISSR
IDNMDQIMAIQMGGDDFIEKPFNLSLTIAKIQALLRRTYDLSVANDSLTVKGCTLILDEAKVVYQEQNIQLSLTELQILK
LLFQNEDKYVSRTALIEKCWESENFIDDNTLAVNMTRLRKKLNTIGVNDFIITKKNVGYKV

Nucleotide


Download         Length: 666 bp        

>NTDB_id=772244 PDI54_RS13600 WP_000697877.1 2731984..2732649(-) (braR) [Staphylococcus aureus strain AF4001]
ATGAAAATATTAATTGTTGAAGATGATTTTGTTATAGCAGAAAGTTTAGCATCTGAACTTAAAAAATGGAATTACGGTGT
TATTGTCGTTGAACAATTTGATGATATACTGTCTATCTTTAACCAACATCAACCTCAGCTTGTATTGCTAGATATTAATT
TGCCAACGTTAAATGGTTTTCATTGGTGTCAAGAAATCCGAAAAACATCTAATGTGCCAATTATATTTATTAGTTCCCGT
ATTGATAATATGGACCAAATTATGGCAATACAAATGGGGGGAGATGATTTTATCGAAAAGCCATTTAACTTGTCATTAAC
GATTGCCAAAATTCAAGCATTATTGAGACGAACTTATGACTTGTCAGTAGCTAATGATTCATTGACGGTTAAAGGTTGTA
CATTAATATTAGATGAAGCAAAAGTCGTGTATCAAGAACAAAACATACAGCTATCTTTGACTGAATTACAAATATTAAAG
TTATTATTTCAAAATGAAGATAAATATGTAAGTAGAACTGCTTTAATTGAAAAATGTTGGGAATCAGAAAACTTCATAGA
TGATAACACATTAGCTGTTAACATGACGCGCCTGCGTAAAAAATTAAATACTATTGGCGTTAATGATTTTATCATTACAA
AGAAAAATGTCGGATATAAAGTATAG

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(3-111)

Transcriptional regulatory protein, C terminal (Trans_reg_C)

(147-220)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A0D1JN68

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braR Staphylococcus aureus N315

100

100

1