Detailed information NTG0077197

Bioinformatically predicted

Overview

• Name: recF
• Type: Machinery gene
• Locus tag: BSG8_RS21200
• Genome accession: NZ_AP025224
• Coordinates: 3957715..3958827 (+)
• Length: 370 a.a.
• NCBI ID: WP_014478578.1
• Uniprot ID: -
• Organism: Bacillus subtilis subsp. natto strain G8
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 3952715..3963827

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
BSG8_RS21175 (BSG8_41980)	rnpA	3953425..3953775 (-)	351	WP_014481515.1	ribonuclease P protein component	-
BSG8_RS21180 (BSG8_41990)	rpmH	3953927..3954061 (-)	135	WP_003178075.1	50S ribosomal protein L34	-
BSG8_RS21185 (BSG8_42000)	dnaA	3954688..3956028 (+)	1341	WP_003242674.1	chromosomal replication initiator protein DnaA	-
BSG8_RS21190 (BSG8_42010)	dnaN	3956217..3957353 (+)	1137	WP_003226811.1	DNA polymerase III subunit beta	-
BSG8_RS21195 (BSG8_42020)	rlbA	3957484..3957699 (+)	216	WP_003226810.1	ribosome maturation protein RlbA	-
BSG8_RS21200 (BSG8_42030)	recF	3957715..3958827 (+)	1113	WP_014478578.1	DNA replication/repair protein RecF	Machinery gene
BSG8_RS21205 (BSG8_42040)	remB	3958845..3959090 (+)	246	WP_003219266.1	extracellular matrix regulator RemB	-
BSG8_RS21210 (BSG8_42050)	gyrB	3959145..3961061 (+)	1917	WP_003226808.1	DNA topoisomerase (ATP-hydrolyzing) subunit B	-
BSG8_RS21215 (BSG8_42060)	gyrA	3961272..3963737 (+)	2466	WP_003244540.1	DNA topoisomerase (ATP-hydrolyzing) subunit A	-

Sequence

Protein

• Length: 370 a.a.
• Molecular weight: 42304.34 Da
• Isoelectric Point: 7.3660

>NTDB_id=77197 BSG8_RS21200 WP_014478578.1 3957715..3958827(+) (recF) [Bacillus subtilis subsp. natto strain G8]
MYIQNLELSSYRNYDHAELQFENKVNVIIGENAQGKTNLMEAIYVLSMAKSHRTSNDKELIRWDKDYAKIEGRVMKQNGA
IPMQLVISKKGKKGKVNHIEQQKLSQYVGALNTIMFAPEDLNLVKGSPQVRRRFLDMEIGQVSPVYLHDLSLYQKILSQR
NHFLKQLQTRKQTDRTMLDVLTDQLIEVAAKVVVKRLQFTAQLEKWAQPIHAGISRGLEELTLKYHTALDVSDPLDLSKI
GDSYQEAFSKLREKEIERGVTLSGPHRDDVLFYVNGRDVQTYGSQGQQRTTALSLKLAEIDLIHEEIGEYPILLLDDVLS
ELDDYRQSHLLHTIQGRVQTFVTTTSVDGIDHETLRQAGMFRVQNGALVK

Nucleotide

• Length: 1113 bp

>NTDB_id=77197 BSG8_RS21200 WP_014478578.1 3957715..3958827(+) (recF) [Bacillus subtilis subsp. natto strain G8]
TTGTATATCCAGAACTTAGAACTTTCATCTTACCGCAACTACGACCATGCTGAACTTCAATTTGAAAATAAAGTAAATGT
GATCATCGGAGAAAACGCCCAGGGGAAGACAAACCTCATGGAGGCGATCTATGTCTTGTCCATGGCGAAATCGCACCGGA
CATCAAATGACAAAGAACTTATACGGTGGGACAAAGACTATGCTAAAATAGAGGGAAGAGTGATGAAGCAAAACGGGGCG
ATCCCGATGCAGCTCGTCATCTCCAAAAAGGGTAAAAAGGGCAAGGTCAATCATATTGAACAGCAAAAGCTCAGCCAGTA
TGTCGGGGCCCTCAACACCATTATGTTCGCGCCGGAAGATTTAAATCTTGTAAAGGGAAGCCCTCAAGTGAGAAGGCGGT
TTCTTGACATGGAAATTGGACAGGTTTCTCCCGTCTATCTTCATGATCTTTCTCTTTACCAGAAAATCCTTTCCCAGCGG
AATCATTTTTTGAAACAGCTGCAAACAAGAAAACAAACTGACCGGACGATGCTCGATGTTCTGACCGATCAGCTTATAGA
AGTTGCAGCAAAAGTCGTCGTAAAACGCCTGCAGTTTACAGCACAGCTCGAGAAATGGGCGCAGCCCATCCATGCAGGCA
TCTCAAGAGGGCTTGAAGAACTTACCCTGAAATACCATACAGCTCTTGATGTATCAGATCCCCTAGATTTGTCGAAAATA
GGAGATAGCTATCAAGAAGCGTTTTCTAAATTAAGAGAAAAAGAAATTGAGCGTGGTGTGACGCTGTCAGGGCCTCATCG
CGATGATGTTCTTTTCTATGTGAACGGACGCGATGTGCAGACGTATGGTTCTCAAGGACAGCAGCGAACGACGGCGTTGT
CCCTTAAGCTGGCGGAGATTGACCTGATCCATGAAGAAATCGGAGAATATCCCATTTTACTATTGGATGATGTACTGAGT
GAACTGGATGATTATCGCCAGTCACACTTGCTTCATACGATCCAAGGCCGTGTACAAACGTTTGTCACAACGACAAGCGT
TGATGGCATTGATCACGAAACCTTACGTCAAGCAGGAATGTTCCGTGTGCAAAATGGTGCGTTAGTGAAGTGA

Domains

Predicted by InterProScan.

• RecF/RecN/SMC N terminal domain (SMC_N) (2-350)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recF	Bacillus subtilis subsp. subtilis str. 168	99.459	100	0.995
recF	Streptococcus pneumoniae R6	45.628	98.919	0.451