NTDB

Overview

Name	clpC	Type	Regulator
Locus tag	AVT_RS09350	Genome accession	NZ_CP115303
Coordinates	1792048..1794648 (-)	Length	866 a.a.
NCBI ID	WP_087965510.1	Uniprot ID	-
Organism	Bacillus tropicus strain JMT105-2
Function	degradation of ComK; degradation of DegU (predicted from homology) Competence regulation

Genomic Context

Location: 1787048..1799648

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AVT_RS09320 (AVT_09320)	fabF	1787208..1788446 (-)	1239	WP_000412652.1	beta-ketoacyl-ACP synthase II	-
AVT_RS09325 (AVT_09325)	fabH	1788478..1789410 (-)	933	WP_087965508.1	beta-ketoacyl-ACP synthase III	-
AVT_RS09330 (AVT_09330)	comZ	1789805..1789981 (-)	177	WP_087965781.1	ComZ family protein	Regulator
AVT_RS09335 (AVT_09335)	-	1790035..1790907 (-)	873	WP_131101622.1	NAD-dependent epimerase/dehydratase family protein	-
AVT_RS09340 (AVT_09340)	-	1790937..1791671 (-)	735	WP_270185387.1	alpha/beta hydrolase	-
AVT_RS09345 (AVT_09345)	-	1791828..1792010 (+)	183	WP_001211116.1	YjzD family protein	-
AVT_RS09350 (AVT_09350)	clpC	1792048..1794648 (-)	2601	WP_087965510.1	ATP-dependent chaperone ClpB	Regulator
AVT_RS09355 (AVT_09355)	-	1794860..1795039 (-)	180	WP_000531421.1	YjzC family protein	-
AVT_RS09360 (AVT_09360)	-	1795531..1796340 (+)	810	WP_001041235.1	Cof-type HAD-IIB family hydrolase	-
AVT_RS09365 (AVT_09365)	-	1796446..1796586 (+)	141	WP_000516816.1	hypothetical protein	-
AVT_RS09370 (AVT_09370)	-	1796587..1796784 (+)	198	WP_087965512.1	DUF3813 domain-containing protein	-
AVT_RS09375 (AVT_09375)	-	1796810..1797667 (-)	858	WP_087965514.1	YitT family protein	-
AVT_RS09380 (AVT_09380)	-	1797768..1797899 (+)	132	WP_001120845.1	DUF3941 domain-containing protein	-
AVT_RS09385 (AVT_09385)	prsA	1798029..1798886 (+)	858	WP_087965516.1	peptidylprolyl isomerase PrsA	-

Sequence

Protein

Download Length: 866 a.a. Molecular weight: 97600.56 Da Isoelectric Point: 5.0876

                                >NTDB_id=771724 AVT_RS09350 WP_087965510.1 1792048..1794648(-) (clpC) [Bacillus tropicus strain JMT105-2]

MDLNQMTTKTQEAIMSAQSLAVSHHHQEVDTVHLLFTLLEEQDGLAVRIFQKMNVDIEALKQGAENLIKKKPSVTGSGAE

AGKLYITGALQQLLVRAEKEAEKLQDDYISVEHVLLAFTEEKGDINQLFTRFHITKDNLLQSLMTVRGNQRVTSQNPEAT

YEALEKYGRDLVAEVRAGKIDPVIGRDSEIRRVIRILSRKTKNNPVLIGEPGVGKTAIVEGLAQRIVKKDVPEGLKDRTI

FALDMSALVAGAKFRGEFEERLQAVLNEIKKSEGRILLFIDELHTIVGAGKTEGAMDAGNMLKPMLARGELHCIGATTLD

EYRKYIEKDPALERRFQQVLAEEPTVEDTISILRGLKERFEIYHGVNIHDRAIVAASVLSDRYISDRFLPDKAIDLVDEA

CATIRTEIDSMPTELDEVTRRIMQLEIEEAALGKEKDFGSQERLKTLQRELSDLKEVASGMRAKWEKEKEDIHKVRDLRE

HLERLRRELEEAEGNYDLNRAAELRHGKIPAIEKELKEAEEMGANNKQENRLLREEVSEEEIADIVSRWTGIPVAKLVEG

EREKLLRLEQILSERVIGQEEAVSLVSDAVLRARAGIKDPNRPIGSFIFLGPTGVGKTELAKTLAQSLFDSEEQMIRIDM

SEYMEKHAVSRLIGAPPGYVGYEEGGQLTEAVRRKPYSVILLDEIEKAHPEVFNILLQMLDDGRITDSQGRTVDFKNTVI

IMTSNIGSAHLLDGLEEDGSIKEESRELVMGQLRGHFRPEFLNRVDEIILFKPLTTNEIKGIVDKIVKELQGRLADRHIT

VELTDAAKEFVVEAGFDPMYGARPLKRYVQRQVETKLARELIAGTITDNSHVVVDVENNELVVHVK

Nucleotide

Download Length: 2601 bp

                                >NTDB_id=771724 AVT_RS09350 WP_087965510.1 1792048..1794648(-) (clpC) [Bacillus tropicus strain JMT105-2]

ATGGACTTAAATCAAATGACAACAAAAACACAAGAGGCGATTATGAGTGCCCAATCTTTAGCGGTATCTCATCATCATCA

AGAAGTAGATACTGTTCATCTCTTGTTTACATTATTAGAAGAGCAAGATGGGTTAGCAGTACGTATTTTTCAAAAAATGA

ATGTCGATATAGAAGCGTTAAAACAAGGTGCCGAAAATTTAATTAAGAAAAAGCCTTCCGTAACGGGAAGCGGTGCAGAA

GCAGGTAAATTATATATAACAGGTGCTTTGCAACAACTACTTGTAAGAGCAGAAAAAGAAGCAGAGAAATTGCAAGATGA

TTACATTTCAGTTGAACATGTATTACTTGCTTTTACTGAAGAAAAAGGCGATATAAACCAATTATTTACAAGATTTCATA

TTACGAAAGATAACTTACTACAGTCTTTAATGACAGTTCGGGGGAATCAAAGAGTGACTAGTCAAAATCCAGAAGCAACT

TATGAAGCGTTAGAAAAATATGGTCGTGATTTAGTGGCGGAAGTAAGAGCGGGGAAAATTGACCCTGTTATCGGACGCGA

TAGTGAAATTCGCCGCGTAATCCGCATTCTTTCACGTAAAACAAAAAACAACCCGGTTTTAATCGGGGAGCCAGGTGTAG

GTAAAACAGCAATTGTTGAAGGATTAGCACAGCGTATTGTGAAAAAGGACGTACCAGAAGGATTAAAAGATAGAACAATT

TTTGCGTTAGATATGAGTGCGCTTGTAGCCGGTGCGAAATTCCGCGGTGAGTTTGAGGAGCGTCTCCAAGCTGTATTAAA

TGAAATTAAAAAGAGTGAAGGTCGTATTTTACTATTCATTGATGAACTTCACACAATCGTCGGCGCTGGTAAAACAGAAG

GTGCGATGGATGCAGGAAATATGTTAAAACCGATGCTTGCGCGTGGTGAACTGCATTGTATCGGGGCGACAACACTAGAT

GAATATCGCAAATATATTGAGAAAGATCCAGCGCTAGAAAGACGTTTCCAACAAGTATTAGCAGAAGAACCAACTGTTGA

AGATACAATTTCTATTTTACGTGGTTTAAAAGAGCGCTTTGAAATTTATCACGGTGTAAATATTCATGACCGCGCGATTG

TAGCAGCATCAGTTTTATCAGATCGATATATTTCGGATCGTTTCTTACCGGATAAAGCAATTGATCTTGTTGACGAAGCG

TGCGCAACAATTCGTACAGAAATTGATTCTATGCCAACAGAATTAGATGAAGTAACGCGCCGCATTATGCAGCTGGAAAT

TGAAGAAGCAGCTCTTGGAAAAGAGAAAGACTTTGGTAGCCAAGAACGTCTAAAAACATTGCAACGTGAATTATCGGATT

TAAAAGAAGTGGCAAGTGGTATGAGAGCCAAATGGGAGAAAGAAAAAGAAGATATTCACAAAGTTCGTGACTTACGTGAA

CATTTAGAGCGTCTGCGCCGTGAATTAGAAGAAGCAGAAGGTAATTACGACTTAAATAGAGCAGCGGAACTTCGCCACGG

AAAAATTCCTGCAATTGAAAAAGAGTTAAAAGAAGCAGAAGAAATGGGTGCGAATAATAAACAAGAAAATCGTTTATTAC

GTGAGGAAGTAAGTGAAGAAGAGATTGCTGATATTGTTTCACGCTGGACTGGTATTCCTGTCGCAAAACTCGTTGAAGGT

GAACGTGAGAAATTATTACGCTTAGAGCAAATTTTATCAGAGCGTGTTATCGGACAAGAAGAAGCGGTAAGCCTAGTATC

AGACGCAGTTCTTCGTGCTCGTGCTGGTATTAAAGACCCGAACCGTCCAATTGGTTCCTTCATTTTCTTAGGACCAACAG

GTGTTGGTAAAACAGAACTTGCGAAAACGCTAGCGCAGTCTTTATTTGATAGTGAAGAGCAAATGATTCGTATTGATATG

TCTGAGTACATGGAGAAACACGCTGTGTCACGCTTAATTGGTGCACCTCCTGGATATGTTGGATATGAAGAGGGTGGTCA

ATTAACAGAAGCAGTAAGACGTAAACCGTATTCCGTTATTTTGTTAGACGAAATCGAAAAAGCACATCCAGAAGTATTCA

ACATTTTATTACAAATGTTAGATGACGGACGCATTACAGATTCGCAAGGACGTACAGTAGACTTTAAAAACACAGTTATT

ATTATGACGTCAAATATTGGATCTGCTCATTTATTAGATGGATTAGAAGAAGATGGCTCCATTAAAGAGGAATCAAGAGA

ACTTGTCATGGGGCAATTAAGAGGACATTTCCGACCAGAGTTTTTAAATCGTGTCGACGAAATTATTTTATTCAAACCTC

TTACAACGAATGAAATTAAAGGTATTGTTGATAAAATTGTAAAAGAATTACAAGGCCGTTTAGCTGACCGTCATATTACG

GTAGAATTAACAGACGCAGCGAAAGAGTTTGTTGTCGAAGCTGGCTTTGATCCAATGTACGGAGCTCGTCCGTTAAAACG

ATATGTACAGCGTCAAGTTGAGACGAAATTAGCGAGAGAATTAATTGCAGGAACGATCACTGACAATAGTCATGTAGTGG

TTGATGTAGAAAATAACGAATTAGTTGTGCATGTGAAGTAA