Detailed information    

insolico Bioinformatically predicted

Overview

Name   mecA   Type   Regulator
Locus tag   AVT_RS09245 Genome accession   NZ_CP115303
Coordinates   1770818..1771501 (-) Length   227 a.a.
NCBI ID   WP_000350711.1    Uniprot ID   A0A2B0Y2P9
Organism   Bacillus tropicus strain JMT105-2     
Function   degradation of ComK (predicted from homology)   
Competence regulation

Genomic Context

Location: 1765818..1776501
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AVT_RS09230 (AVT_09230) pepF 1765999..1767825 (-) 1827 WP_270185385.1 oligoendopeptidase F Regulator
  AVT_RS09235 (AVT_09235) - 1767876..1769120 (-) 1245 WP_270185386.1 competence protein CoiA -
  AVT_RS09240 (AVT_09240) - 1769201..1770745 (-) 1545 WP_000799204.1 cardiolipin synthase -
  AVT_RS09245 (AVT_09245) mecA 1770818..1771501 (-) 684 WP_000350711.1 adaptor protein MecA Regulator
  AVT_RS09250 (AVT_09250) - 1771829..1772503 (+) 675 WP_000362615.1 TerC family protein -
  AVT_RS09255 (AVT_09255) spx 1772553..1772948 (-) 396 WP_000258267.1 transcriptional regulator Spx -
  AVT_RS09260 (AVT_09260) - 1773542..1773745 (+) 204 WP_000559976.1 hypothetical protein -
  AVT_RS09265 (AVT_09265) - 1773774..1775420 (-) 1647 WP_087965503.1 peptide ABC transporter substrate-binding protein -

Sequence

Protein


Download         Length: 227 a.a.        Molecular weight: 26965.02 Da        Isoelectric Point: 3.9986

>NTDB_id=771720 AVT_RS09245 WP_000350711.1 1770818..1771501(-) (mecA) [Bacillus tropicus strain JMT105-2]
MDIERINDHTMKFFITYIDIEDRGFNREEIWYDRERSEELFWEMMDEARDHDDFFIDGPLWIQVQAVDKGIEVLVTKAEL
SKDGQKLELPIGVDKIIDIPLDEGIESLFQQELVEEVEEQAGTNFNEDGTFGFLIKFNDFEDVISLSHRLIFEDIKDELY
SFENRYYVYVEFDEVLHDEEEIDRILSIVLEYGEESTLTIHRVSEYGKQIVKEHALETIRNNFPAKT

Nucleotide


Download         Length: 684 bp        

>NTDB_id=771720 AVT_RS09245 WP_000350711.1 1770818..1771501(-) (mecA) [Bacillus tropicus strain JMT105-2]
TTGGATATTGAAAGAATTAATGATCATACGATGAAATTTTTTATTACGTACATTGATATAGAGGACAGAGGCTTTAATCG
TGAGGAAATTTGGTATGACCGCGAAAGAAGCGAAGAGCTCTTTTGGGAAATGATGGACGAAGCTCGTGATCATGACGATT
TCTTTATTGATGGGCCGTTATGGATTCAAGTGCAAGCAGTCGATAAAGGGATTGAAGTACTTGTAACGAAAGCAGAACTT
TCAAAGGATGGACAAAAGCTAGAACTGCCAATAGGTGTAGATAAAATTATAGACATTCCTTTAGATGAAGGCATTGAATC
ATTATTCCAGCAAGAATTAGTGGAAGAGGTAGAAGAACAAGCAGGTACAAACTTTAACGAAGATGGTACGTTTGGCTTTT
TAATTAAGTTTAATGATTTTGAAGATGTCATTTCCTTAAGCCACCGTCTTATCTTTGAAGATATAAAAGATGAGCTGTAT
TCATTTGAGAACCGCTATTATGTATATGTGGAATTCGATGAAGTGCTACATGATGAAGAAGAAATTGACCGCATTTTAAG
TATTGTTTTAGAATACGGAGAAGAATCAACTTTAACCATTCATCGTGTAAGTGAGTATGGGAAACAAATTGTGAAAGAGC
ATGCGCTTGAAACAATTCGCAATAATTTTCCTGCTAAAACGTAG

Domains

Predicted by InterproScan.

Negative regulator of genetic competence (MecA) (MecA)

(1-219)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A2B0Y2P9

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  mecA Bacillus subtilis subsp. subtilis str. 168

56.579

100

0.568