Detailed information NTG0771506

Bioinformatically predicted

Overview

• Name: clpX
• Type: Regulator
• Locus tag: QQ984_RS15000
• Genome accession: NZ_CP127223
• Coordinates: 2863657..2864922 (-)
• Length: 421 a.a.
• NCBI ID: WP_003184083.1
• Uniprot ID: A0A6I7TM22
• Organism: Bacillus licheniformis strain Jrh14-10
• Function: require for competence development (predicted from homology) Competence regulation

Genomic Context

Location: 2858657..2869922

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
QQ984_RS14985 (QQ984_14985)	yihA	2858692..2859279 (-)	588	WP_003184076.1	ribosome biogenesis GTP-binding protein YihA/YsxC	-
QQ984_RS14990 (QQ984_14990)	lon	2859276..2861600 (-)	2325	WP_009329308.1	endopeptidase La	-
QQ984_RS14995 (QQ984_14995)	lonB	2861819..2863474 (-)	1656	WP_003184080.1	ATP-dependent protease LonB	-
QQ984_RS15000 (QQ984_15000)	clpX	2863657..2864922 (-)	1266	WP_003184083.1	ATP-dependent protease ATP-binding subunit ClpX	Regulator
QQ984_RS15005 (QQ984_15005)	tig	2865191..2866465 (-)	1275	WP_011198167.1	trigger factor	-
QQ984_RS15010 (QQ984_15010)	ddcA	2866692..2867699 (-)	1008	WP_003184086.1	DNA damage checkpoint antagonist DdcA	-
QQ984_RS15015 (QQ984_15015)	leuD	2867829..2868428 (-)	600	WP_009329311.1	3-isopropylmalate dehydratase small subunit	-
QQ984_RS15020 (QQ984_15020)	leuC	2868441..2869859 (-)	1419	WP_009329313.1	3-isopropylmalate dehydratase large subunit	-

Sequence

Protein

• Length: 421 a.a.
• Molecular weight: 46684.76 Da
• Isoelectric Point: 4.7004

>NTDB_id=771506 QQ984_RS15000 WP_003184083.1 2863657..2864922(-) (clpX) [Bacillus licheniformis strain Jrh14-10]
MFKFNEEKGQLKCSFCGKTQDQVRKLVAGPGVYICDECIELCTEIVEEELGSEEEVEFKDVPKPKEIREILDEYVIGQDQ
AKKSLAVAVYNHYKRINSNSKVDDVELSKSNISMIGPTGSGKTLLAQTLARILNVPFAIADATSLTEAGYVGEDVENILL
KLIQAADYDVEKAEKGIIYIDEIDKVARKSENPSITRDVSGEGVQQALLKILEGTVASVPPQGGRKHPHQEFIQIDTTNI
LFICGGAFDGIEQIIKRRLGQKVIGFGSDNKHEDLEKEALLSKVLPEDLLRFGLIPEFIGRLPIIASLEPLDEKALVEIL
TKPKNALVKQYRKMLELDDVELVFEDEALTEIAKKAIERKTGARGLRSIIEGIMLDVMFDLPSREDIEKCVITGKTVTDG
EPPRLIMKDGTVVNKDKKTSA

Nucleotide

• Length: 1266 bp

>NTDB_id=771506 QQ984_RS15000 WP_003184083.1 2863657..2864922(-) (clpX) [Bacillus licheniformis strain Jrh14-10]
ATGTTTAAATTCAACGAGGAAAAAGGACAATTGAAATGCTCGTTTTGCGGTAAAACACAAGATCAGGTACGCAAGCTTGT
CGCCGGACCAGGCGTATATATATGTGACGAGTGCATCGAACTTTGCACTGAAATTGTAGAAGAGGAACTCGGCTCTGAAG
AAGAAGTGGAGTTCAAAGATGTTCCGAAGCCAAAGGAAATCCGCGAGATTCTTGATGAATACGTCATCGGCCAGGACCAG
GCAAAAAAATCCCTTGCCGTGGCCGTCTACAATCATTACAAGCGGATCAATTCGAACAGCAAAGTCGACGACGTCGAGCT
GTCAAAAAGTAACATTTCCATGATCGGACCGACTGGAAGCGGAAAAACGCTTCTTGCTCAAACGCTTGCCCGCATCCTGA
ATGTGCCGTTCGCCATTGCGGATGCCACGTCGCTTACTGAAGCAGGCTATGTCGGTGAAGATGTGGAGAACATTTTGCTT
AAGCTGATCCAGGCAGCTGACTACGATGTTGAAAAAGCGGAAAAAGGCATTATCTACATCGATGAAATCGATAAAGTGGC
CAGAAAGTCCGAGAACCCTTCGATTACACGCGATGTATCAGGCGAAGGCGTTCAGCAGGCATTGCTTAAAATTCTTGAAG
GTACGGTTGCCAGCGTTCCTCCACAAGGCGGAAGAAAGCATCCTCATCAAGAGTTCATCCAAATTGACACAACCAACATC
CTGTTCATTTGCGGCGGAGCTTTTGACGGAATCGAGCAGATCATCAAGCGCCGTCTCGGCCAGAAGGTCATCGGCTTCGG
CTCTGACAACAAGCATGAAGACCTTGAAAAAGAAGCGCTTCTTTCCAAAGTGCTTCCGGAAGACTTGCTTCGCTTCGGGC
TGATCCCTGAATTCATCGGCCGTCTCCCGATCATCGCAAGCCTTGAGCCGCTGGATGAAAAAGCGCTGGTTGAAATTTTA
ACAAAACCGAAAAACGCGCTTGTTAAACAATATAGAAAAATGCTTGAATTGGATGATGTGGAGCTTGTGTTTGAAGACGA
AGCGCTCACAGAAATCGCTAAAAAAGCAATTGAACGTAAAACAGGAGCACGCGGACTTCGTTCCATTATCGAAGGAATCA
TGCTCGACGTGATGTTTGATCTGCCGTCTCGCGAGGATATTGAAAAATGCGTGATCACAGGCAAAACCGTCACTGACGGC
GAACCGCCGCGTCTCATTATGAAAGACGGCACGGTCGTCAATAAAGACAAAAAAACTTCAGCATAA

Domains

Predicted by InterProScan.

• AAA domain (Cdc48 subfamily) (AAA_2) (109-305)

• C-terminal, D2-small domain, of ClpB protein (ClpB_D2-small) (311-389)

• ClpX C4-type zinc finger (zf-C4_ClpX) (11-48)

3D structure

• AlphaFold DB: A0A6I7TM22

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpX	Streptococcus mutans UA159	68.766	94.299	0.648
clpX	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	59.413	97.15	0.577