Detailed information    

insolico Bioinformatically predicted

Overview


Name   recP/tkt   Type   Machinery gene
Locus tag   QQ984_RS10485 Genome accession   NZ_CP127223
Coordinates   2014756..2016759 (+) Length   667 a.a.
NCBI ID   WP_095240068.1    Uniprot ID   -
Organism   Bacillus licheniformis strain Jrh14-10     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context


Location: 2009756..2021759
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QQ984_RS10450 (QQ984_10450) - 2009894..2010655 (+) 762 WP_003182215.1 hypothetical protein -
  QQ984_RS10455 (QQ984_10455) - 2010715..2011554 (+) 840 WP_003182218.1 thymidylate synthase -
  QQ984_RS10460 (QQ984_10460) nucA/comI 2011913..2012341 (+) 429 WP_003182220.1 NucA/NucB deoxyribonuclease domain-containing protein Machinery gene
  QQ984_RS10465 (QQ984_10465) dinR/lexA 2012537..2013160 (-) 624 WP_003182222.1 transcriptional repressor LexA Regulator
  QQ984_RS10470 (QQ984_10470) yneA 2013313..2013624 (+) 312 WP_003182225.1 cell division suppressor protein YneA -
  QQ984_RS10475 (QQ984_10475) - 2013643..2014290 (+) 648 WP_003182227.1 recombinase family protein -
  QQ984_RS10480 (QQ984_10480) - 2014356..2014589 (+) 234 WP_003182231.1 DUF896 domain-containing protein -
  QQ984_RS10485 (QQ984_10485) recP/tkt 2014756..2016759 (+) 2004 WP_095240068.1 transketolase Machinery gene
  QQ984_RS10490 (QQ984_10490) sirA 2016914..2017351 (+) 438 WP_003182234.1 sporulation inhibitor of replication protein SirA -
  QQ984_RS10495 (QQ984_10495) - 2017436..2017654 (+) 219 WP_003182236.1 YneF family protein -
  QQ984_RS10500 (QQ984_10500) - 2017735..2017896 (-) 162 WP_202604361.1 aspartyl-phosphate phosphatase Spo0E family protein -
  QQ984_RS10505 (QQ984_10505) - 2018139..2018846 (+) 708 WP_011198008.1 cytochrome c biogenesis protein CcdA -
  QQ984_RS10510 (QQ984_10510) spo0A 2018928..2019299 (+) 372 WP_009328223.1 response regulator Regulator
  QQ984_RS10515 (QQ984_10515) - 2019373..2019867 (+) 495 WP_085959522.1 cytochrome c biogenesis protein CcdC -
  QQ984_RS10520 (QQ984_10520) - 2019903..2020331 (-) 429 WP_269195053.1 DUF2621 family protein -
  QQ984_RS10525 (QQ984_10525) - 2020536..2020943 (-) 408 WP_003182248.1 Hsp20/alpha crystallin family protein -
  QQ984_RS10530 (QQ984_10530) - 2021079..2021225 (-) 147 WP_003182250.1 small acid-soluble spore protein P -
  QQ984_RS10535 (QQ984_10535) sspO 2021267..2021413 (-) 147 WP_003182252.1 small acid-soluble spore protein O -

Sequence


Protein


Download         Length: 667 a.a.        Molecular weight: 72666.81 Da        Isoelectric Point: 4.8350

>NTDB_id=771474 QQ984_RS10485 WP_095240068.1 2014756..2016759(+) (recP/tkt) [Bacillus licheniformis strain Jrh14-10]
MKTIELKSVATIRTLSIDAIEKAKSGHPGMPMGTAPMAYALWTKMMNVSPENPNWFNRDRFVLSAGHGSMLLYSMLHLSG
YDVSIEDLKNFRQWGSKTPGHPEFGHTPGVDATTGPLGQGIGMAVGMALAERHLAETYNRDDYRVVDHYTYSICGDGDLM
EGISSEAASLAGHLNLGRLIVLYDSNDISLDGELNRSFSENVKQRFEAMNWEVLYVEDGNNIAEITAAIEKAKQNEKQPT
LIEVKTTIGFGSPNRAGTSGVHGAPLGSEEAKLTKEAYEWTYEEDFYVPSEVYEHFNETVKEAGKKKEAEWNELFSAYKK
AHPELAEELELAIKGELPEGWDQKVPVYEKGSSLASRASSGEVLNGIAQQVPFFFGGSADLAGSNKTTIKNGGDVSAKDY
ASRNIWFGVREFAMGAALNGMALHGGLRVFGGTFFVFSDYLRPAIRLAALMGLPVTYVFTHDSIAVGEDGPTHEPIEQLA
SLRALPNLSVIRPADGNETAAAWKLALQSKDQPTALVLTRQNLPTIDQSAETAYEGVKKGAYVVSKSQNEKPEAILLASG
SEVGLALDAQSELQKEGIDVSVVSVPSWDRFDKQPAEYKNAVLPTDVTKRLAIEMGSPLGWERYTGTDGDILGIDQFGAS
APGETIMKEYGFTPANVVDRVKKLLNR

Nucleotide


Download         Length: 2004 bp        

>NTDB_id=771474 QQ984_RS10485 WP_095240068.1 2014756..2016759(+) (recP/tkt) [Bacillus licheniformis strain Jrh14-10]
ATGAAAACGATTGAATTAAAATCTGTCGCAACAATACGAACACTCTCCATAGACGCGATTGAAAAAGCTAAATCCGGTCA
CCCCGGCATGCCGATGGGGACTGCTCCGATGGCTTATGCGCTTTGGACAAAAATGATGAATGTCAGCCCTGAAAATCCGA
ATTGGTTTAACAGGGACCGTTTTGTGCTTTCCGCCGGACACGGATCAATGCTTTTGTACAGCATGCTTCACTTAAGCGGA
TATGACGTTTCAATTGAAGACCTCAAAAATTTCCGCCAATGGGGAAGCAAAACTCCTGGGCATCCGGAATTCGGACATAC
TCCGGGTGTAGATGCGACTACAGGTCCGCTTGGCCAAGGAATCGGAATGGCTGTCGGAATGGCGCTTGCTGAACGTCACC
TTGCTGAAACTTACAACCGTGACGACTATCGCGTCGTTGACCATTATACATACAGCATTTGCGGTGACGGAGACTTGATG
GAGGGAATTTCATCCGAAGCGGCTTCGCTTGCGGGACATTTGAACCTCGGCCGTCTCATCGTGCTTTATGATTCAAATGA
CATTTCGCTTGACGGCGAACTAAACCGCTCATTCTCTGAAAATGTAAAGCAGCGCTTTGAAGCGATGAATTGGGAAGTGC
TTTATGTTGAAGACGGCAACAACATTGCCGAAATTACGGCGGCCATCGAGAAAGCGAAACAAAATGAAAAGCAGCCGACA
TTAATTGAAGTGAAAACAACGATCGGTTTCGGTTCTCCAAACCGTGCGGGCACATCCGGCGTCCACGGCGCTCCGCTCGG
ATCAGAAGAGGCGAAATTAACGAAGGAAGCGTATGAGTGGACATACGAAGAAGATTTTTATGTTCCTTCCGAAGTGTACG
AGCACTTTAACGAAACAGTGAAGGAAGCGGGCAAGAAAAAAGAGGCGGAATGGAACGAACTGTTCTCCGCATACAAGAAA
GCCCACCCGGAACTTGCCGAAGAGCTTGAACTGGCGATCAAAGGCGAGCTTCCTGAAGGATGGGATCAGAAAGTACCTGT
ATATGAAAAAGGAAGCAGCCTTGCTTCACGTGCATCCTCAGGTGAAGTGTTAAACGGAATCGCTCAACAAGTGCCGTTTT
TCTTTGGCGGATCCGCGGACTTGGCCGGTTCCAACAAAACGACAATCAAAAACGGCGGAGATGTTTCAGCGAAGGATTAC
GCCAGCAGAAATATCTGGTTCGGTGTAAGGGAATTTGCGATGGGAGCAGCTTTGAACGGAATGGCTCTTCACGGAGGCCT
CCGCGTATTCGGTGGAACGTTCTTCGTTTTCTCCGATTACTTGAGACCAGCGATTCGTCTTGCTGCATTGATGGGGCTTC
CTGTCACCTATGTATTTACACATGACAGCATTGCCGTCGGTGAAGACGGACCGACTCATGAGCCGATTGAACAGCTGGCA
TCACTTCGTGCGCTGCCGAACTTGTCCGTCATCAGACCTGCCGACGGAAATGAAACAGCAGCTGCCTGGAAGCTCGCGCT
TCAATCAAAAGACCAGCCGACTGCGCTTGTGTTGACACGCCAAAACTTGCCGACAATCGATCAGTCTGCTGAAACGGCTT
ATGAAGGCGTTAAAAAGGGTGCATATGTCGTTTCAAAAAGCCAAAACGAAAAACCGGAAGCGATCTTGCTTGCGAGCGGA
TCTGAAGTTGGCCTTGCGCTTGATGCACAAAGCGAGCTGCAAAAAGAAGGCATTGACGTATCCGTTGTCAGCGTTCCGTC
ATGGGATCGATTTGACAAGCAGCCGGCTGAATATAAAAACGCTGTTCTTCCAACTGATGTGACAAAGCGTCTCGCAATTG
AAATGGGATCGCCGCTCGGATGGGAGAGATATACAGGCACTGACGGGGACATTCTCGGAATCGACCAGTTCGGTGCATCA
GCTCCTGGCGAAACGATCATGAAAGAATACGGTTTTACGCCTGCGAATGTAGTTGACCGGGTGAAAAAACTGTTAAATCG
CTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recP/tkt Streptococcus pneumoniae TIGR4

57.768

99.4

0.574