Detailed information NTG0771450

Bioinformatically predicted

Overview

• Name: clpE
• Type: Regulator
• Locus tag: QQ984_RS07615
• Genome accession: NZ_CP127223
• Coordinates: 1486523..1488619 (-)
• Length: 698 a.a.
• NCBI ID: WP_095240290.1
• Uniprot ID: -
• Organism: Bacillus licheniformis strain Jrh14-10
• Function: repress competence development (at the early growth phase) (predicted from homology) Competence regulation

Genomic Context

Location: 1481523..1493619

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
QQ984_RS07585 (QQ984_07585)	-	1481668..1481997 (-)	330	WP_011197892.1	YkvA family protein	-
QQ984_RS07590 (QQ984_07590)	-	1482216..1482458 (+)	243	WP_003181085.1	aspartyl-phosphate phosphatase Spo0E family protein	-
QQ984_RS07595 (QQ984_07595)	-	1482520..1484031 (-)	1512	WP_003181087.1	PAS domain-containing sensor histidine kinase	-
QQ984_RS07600 (QQ984_07600)	-	1484269..1484724 (+)	456	WP_003181089.1	MarR family transcriptional regulator	-
QQ984_RS07605 (QQ984_07605)	motB	1484749..1485528 (-)	780	WP_003181091.1	flagellar motor protein MotB	-
QQ984_RS07610 (QQ984_07610)	motA	1485521..1486324 (-)	804	WP_003181093.1	flagellar motor stator protein MotA	-
QQ984_RS07615 (QQ984_07615)	clpE	1486523..1488619 (-)	2097	WP_095240290.1	ATP-dependent protease ATP-binding subunit ClpE	Regulator
QQ984_RS07620 (QQ984_07620)	-	1488840..1489874 (+)	1035	WP_003181096.1	hypothetical protein	-
QQ984_RS07625 (QQ984_07625)	queC	1490139..1490798 (+)	660	WP_003181098.1	7-cyano-7-deazaguanine synthase QueC	-
QQ984_RS07630 (QQ984_07630)	queD	1490801..1491241 (+)	441	WP_003181100.1	6-carboxytetrahydropterin synthase QueD	-
QQ984_RS07635 (QQ984_07635)	queE	1491234..1491965 (+)	732	WP_003181103.1	7-carboxy-7-deazaguanine synthase QueE	-
QQ984_RS07640 (QQ984_07640)	queF	1491987..1492484 (+)	498	WP_009328607.1	preQ(1) synthase	-
QQ984_RS07645 (QQ984_07645)	-	1492692..1492901 (+)	210	Protein_1455	helix-turn-helix domain-containing protein	-

Sequence

Protein

• Length: 698 a.a.
• Molecular weight: 78097.26 Da
• Isoelectric Point: 5.6308

>NTDB_id=771450 QQ984_RS07615 WP_095240290.1 1486523..1488619(-) (clpE) [Bacillus licheniformis strain Jrh14-10]
MRCQHCQKNEATIRLNMQINFTKKQMDLCEDCYKELTQPSMFSGNHFFGGGGSFFSQPSQAQTQIAAKKGLLDELAVNLT
NAAKTGLIDPVIGRDDEVARVIEILNRRNKNNPVLIGEPGVGKTAVAEGLALKIAEGDVPNKLKNKELYLLDVASLVANT
GIRGQFEERMKQLMKELKERKNAILFIDEIHLLVGAGSAEGSMDAGNILKPALARGELQVIGATTLKEYRQIEKDAALER
RFQPIMVHEPTIEQAAAILNGLKEKYEAYHDVTYTDEAIKACVVLSSRYIQDRHLPDKAIDLLDEAGSKANLKIDTVSGE
QASQRLQEIEAEKAKALQEENYELAAKLRDEEEALHKKMESHEEEKRATVEAEDIQAIIEQKTGIPVGKLQHDDQKKMKE
LEAHLSSRVIGQKEAVKKVAKAVRRSRAGLKSKNRPVGSFLFVGPTGVGKTELSKRLAEELFGTKDAIIRLDMSEYMEKH
AVSKLIGSPPGYVGHEEAGQLTEKVRRNPYSIVLLDEIEKAHPDVQHMFLQIMEDGRLTDSQGRTVSFKDTVIIMTSNAG
VSEKRTTVGFNREEQVMGEQSMIDSLSGYFKPEFLNRFDSIIEFQPLEKEDLVKIAALLLKELEETLKEQNMTLEVSDEA
KEKIAEIGYHPAFGARPLRRTIQTAVEDQMTDLLLEEEHIKGFAVIVENDEIRVKTTR

Nucleotide

• Length: 2097 bp

>NTDB_id=771450 QQ984_RS07615 WP_095240290.1 1486523..1488619(-) (clpE) [Bacillus licheniformis strain Jrh14-10]
ATGCGTTGTCAACATTGTCAAAAAAATGAGGCGACGATTCGCCTAAACATGCAAATCAACTTTACAAAAAAACAAATGGA
TTTATGTGAAGACTGCTATAAAGAGCTGACTCAGCCTTCTATGTTTTCAGGAAATCACTTTTTTGGCGGCGGAGGTTCTT
TCTTCAGCCAGCCATCACAAGCGCAGACGCAAATCGCTGCCAAAAAAGGCTTGCTCGATGAACTTGCCGTCAATTTAACA
AATGCAGCAAAGACCGGCTTGATCGATCCGGTGATCGGCCGCGATGATGAAGTAGCCCGTGTGATCGAGATCTTAAACCG
CAGAAATAAAAACAATCCGGTCTTAATCGGTGAACCGGGCGTCGGTAAAACAGCCGTCGCTGAAGGACTTGCTCTCAAAA
TCGCCGAAGGCGATGTTCCAAATAAATTGAAAAACAAAGAGCTCTACCTGCTTGATGTCGCTTCCCTCGTGGCAAACACC
GGCATCAGAGGGCAATTTGAAGAAAGAATGAAACAGCTGATGAAAGAGCTGAAAGAACGCAAAAACGCAATCTTGTTTAT
TGACGAAATTCACCTTCTTGTCGGGGCCGGCTCTGCAGAAGGCTCCATGGATGCGGGCAACATTTTAAAACCTGCACTTG
CCAGAGGCGAGCTGCAAGTTATCGGCGCTACGACGTTGAAGGAATATCGCCAAATTGAAAAAGATGCGGCGTTAGAGCGG
CGCTTCCAGCCGATCATGGTGCACGAACCGACAATTGAGCAGGCCGCAGCGATTTTAAACGGGCTCAAGGAAAAATACGA
AGCATATCACGATGTGACTTACACGGATGAAGCGATCAAAGCCTGCGTCGTTCTGTCAAGCCGCTATATTCAGGACCGCC
ATCTTCCCGATAAGGCGATCGACCTTTTGGATGAAGCCGGTTCAAAAGCGAACTTGAAAATCGACACGGTCAGCGGTGAA
CAAGCTTCCCAACGCCTGCAAGAAATCGAAGCGGAAAAAGCCAAAGCGCTTCAAGAAGAAAACTACGAGCTTGCAGCAAA
ACTCCGCGACGAAGAAGAAGCGCTGCATAAAAAAATGGAAAGCCATGAGGAAGAAAAACGGGCAACAGTTGAAGCGGAAG
ACATTCAAGCGATCATCGAACAAAAAACCGGCATTCCGGTCGGCAAGCTTCAGCACGACGATCAGAAGAAAATGAAAGAG
CTTGAAGCACACCTTTCAAGCCGCGTGATCGGTCAAAAAGAAGCGGTGAAAAAAGTGGCAAAAGCCGTCAGAAGAAGCCG
CGCCGGCCTGAAATCAAAAAACAGGCCTGTCGGTTCATTCCTGTTCGTCGGCCCGACAGGTGTCGGTAAAACAGAACTTT
CTAAAAGGCTTGCGGAAGAACTGTTCGGCACGAAGGATGCCATCATCCGCCTCGATATGAGCGAATACATGGAAAAACAC
GCCGTATCAAAGCTGATCGGTTCACCTCCTGGATATGTCGGCCACGAAGAAGCCGGACAGCTTACCGAAAAAGTCCGGAG
GAACCCGTACAGCATCGTTTTGCTCGATGAAATCGAAAAAGCCCATCCCGATGTCCAGCACATGTTCCTGCAAATCATGG
AAGACGGACGTCTGACAGACAGCCAAGGGCGGACGGTCAGCTTTAAAGATACCGTCATTATTATGACAAGCAATGCCGGT
GTATCTGAAAAGCGGACAACCGTCGGTTTTAACCGGGAAGAGCAAGTAATGGGCGAACAATCAATGATCGATTCATTAAG
CGGCTACTTTAAGCCGGAATTCCTGAACAGATTTGACAGCATCATCGAATTCCAGCCGCTCGAAAAAGAAGATCTGGTCA
AGATCGCCGCCCTCTTGCTGAAAGAGCTTGAAGAAACGTTAAAAGAGCAAAACATGACGCTCGAAGTTTCAGATGAGGCA
AAAGAAAAAATCGCTGAAATCGGATACCATCCGGCCTTTGGCGCCCGCCCATTAAGAAGAACCATTCAAACAGCGGTCGA
AGATCAAATGACCGATCTGCTGCTTGAAGAAGAACACATCAAAGGTTTTGCGGTTATCGTTGAAAACGATGAAATCCGGG
TGAAAACAACCAGATAA

Domains

Predicted by InterProScan.

• AAA lid domain (AAA_lid_9) (252-350)

• ATPase family associated with various cellular activities (AAA) (AAA) (114-245)

• C-terminal, D2-small domain, of ClpB protein (ClpB_D2-small) (607-682)

• AAA domain (Cdc48 subfamily) (AAA_2) (435-601)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpE	Streptococcus mutans UA159	56.283	100	0.603
clpE	Streptococcus pneumoniae TIGR4	55.615	100	0.596
clpE	Streptococcus pneumoniae Rx1	55.615	100	0.596
clpE	Streptococcus pneumoniae D39	55.615	100	0.596
clpE	Streptococcus pneumoniae R6	55.615	100	0.596
clpC	Lactococcus lactis subsp. cremoris KW2	55.586	100	0.585
clpC	Bacillus subtilis subsp. subtilis str. 168	53.916	95.129	0.513
clpC	Lactococcus lactis subsp. lactis strain DGCC12653	47.68	89.542	0.427
clpC	Streptococcus thermophilus LMD-9	46.384	91.117	0.423
clpC	Streptococcus thermophilus LMG 18311	46.372	90.831	0.421
clpC	Streptococcus pneumoniae TIGR4	47.03	89.255	0.42
clpC	Streptococcus pneumoniae Rx1	47.03	89.255	0.42
clpC	Streptococcus pneumoniae D39	47.03	89.255	0.42
clpC	Streptococcus mutans UA159	46.916	88.252	0.414
clpA	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	42.669	86.963	0.371