Detailed information    

insolico Bioinformatically predicted

Overview


Name   disA   Type   Machinery gene
Locus tag   QOM21_RS16050 Genome accession   NZ_CP127172
Coordinates   3658862..3660007 (+) Length   381 a.a.
NCBI ID   WP_407550764.1    Uniprot ID   -
Organism   Streptomyces sp. Pv4-95 voucher LV 740     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context


Location: 3653862..3665007
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QOM21_RS16035 (QOM21_16040) - 3654263..3655114 (+) 852 WP_407550759.1 hypothetical protein -
  QOM21_RS16040 (QOM21_16045) - 3655182..3657023 (-) 1842 WP_407550761.1 BACON domain-containing protein -
  QOM21_RS16045 (QOM21_16050) radA 3657322..3658734 (+) 1413 WP_398558202.1 DNA repair protein RadA Machinery gene
  QOM21_RS16050 (QOM21_16055) disA 3658862..3660007 (+) 1146 WP_407550764.1 DNA integrity scanning diadenylate cyclase DisA Machinery gene
  QOM21_RS16055 (QOM21_16060) - 3660078..3661073 (-) 996 WP_407550765.1 NAD-dependent epimerase/dehydratase family protein -
  QOM21_RS16060 (QOM21_16065) - 3661255..3662097 (-) 843 WP_407550767.1 hypothetical protein -
  QOM21_RS16065 (QOM21_16070) - 3662359..3662847 (-) 489 WP_407550768.1 pyridoxamine 5'-phosphate oxidase family protein -
  QOM21_RS16070 (QOM21_16075) - 3663229..3664188 (+) 960 WP_407550770.1 A/G-specific adenine glycosylase -

Sequence


Protein


Download         Length: 381 a.a.        Molecular weight: 41206.14 Da        Isoelectric Point: 5.0193

>NTDB_id=771371 QOM21_RS16050 WP_407550764.1 3658862..3660007(+) (disA) [Streptomyces sp. Pv4-95 voucher LV 740]
MAANDRASSPGGRSGWVPPYRRSGDTEGLMRASLSAVAPGTALRDGLERILRGNTGGLIVLGFDKTVESMCTGGFVLDVE
FTATRLRELCKLDGALVIDKDITKIMRAGVQLVPDASIPTEETGTRHRTAQRVSIQAGFPVVSVSQSMRLIALYVDGERR
VLEESAAILSRANQALATLERYKLRLDEVAGTLSALEIEDLVTVRDVSAVAQRLEMVRRIATEIAEYVVELGTDGRLLTL
QLDELIAGVEPERELVVRDYVPEPTAKRSRTVVEALAELDALSHTELLELPTVARALGYSGSPETLDSAVSPRGFRLLAK
VPRLPGTVIDRLVDHFGGLQKLLAASVDDLQAVDGVGEARARSVREGLSRLAESSILERYV

Nucleotide


Download         Length: 1146 bp        

>NTDB_id=771371 QOM21_RS16050 WP_407550764.1 3658862..3660007(+) (disA) [Streptomyces sp. Pv4-95 voucher LV 740]
GTGGCAGCCAACGACCGGGCATCGTCCCCTGGTGGCAGGTCTGGTTGGGTTCCGCCCTACCGAAGGTCGGGGGACACCGA
GGGCCTGATGCGTGCCTCGCTGAGCGCCGTCGCGCCCGGTACGGCCCTGCGTGACGGCCTGGAGCGCATCCTCCGGGGCA
ACACCGGCGGCCTGATCGTGCTGGGCTTCGACAAGACCGTCGAGTCCATGTGCACCGGCGGCTTCGTGCTGGACGTGGAA
TTCACCGCGACCCGGCTGCGCGAGCTGTGCAAGCTCGACGGCGCGCTGGTCATCGACAAGGACATCACCAAGATCATGCG
GGCCGGGGTGCAGCTGGTCCCGGACGCCTCCATCCCCACCGAGGAGACCGGCACCCGCCACCGCACGGCCCAGCGCGTCT
CGATCCAGGCGGGCTTCCCCGTCGTCTCGGTCAGCCAGTCCATGCGGCTGATCGCGCTGTACGTCGACGGCGAGCGCCGC
GTCCTGGAGGAGTCGGCCGCGATCCTCTCCCGGGCGAACCAGGCGCTGGCGACCCTGGAGCGCTACAAACTGCGCCTGGA
CGAGGTCGCCGGCACCCTGTCCGCCCTGGAGATCGAGGACTTGGTGACGGTCCGCGATGTCTCCGCGGTCGCCCAGCGCC
TGGAGATGGTCCGCCGGATCGCCACCGAGATCGCCGAATACGTCGTCGAACTCGGCACGGACGGCCGGCTGCTCACCCTC
CAGCTCGACGAGCTGATCGCCGGAGTGGAGCCCGAGCGCGAACTGGTCGTCCGCGACTACGTCCCCGAGCCGACCGCCAA
GCGCTCGCGCACGGTCGTCGAGGCGCTCGCCGAGCTGGACGCGCTCAGCCACACCGAACTGCTCGAACTCCCCACCGTGG
CCCGCGCGTTGGGCTACAGCGGCTCTCCCGAGACGCTGGACTCCGCGGTCTCGCCGCGCGGCTTCCGCCTGCTGGCGAAG
GTCCCGCGGCTGCCCGGCACGGTCATCGACCGCCTCGTCGACCACTTCGGCGGCCTGCAGAAGCTGCTCGCCGCGAGCGT
CGACGACCTTCAGGCGGTGGACGGCGTCGGCGAGGCCCGCGCCCGCTCGGTCCGCGAGGGCCTGTCCAGGCTCGCGGAGT
CGTCGATCCTGGAGCGGTACGTCTGA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  disA Bacillus subtilis subsp. subtilis str. 168

44.798

90.814

0.407