Detailed information NTG0771354

Bioinformatically predicted

Overview

• Name: comA
• Type: Machinery gene
• Locus tag: PCP57_RS22815
• Genome accession: NZ_CP115287
• Coordinates: 4904979..4907204 (-)
• Length: 741 a.a.
• NCBI ID: WP_058179039.1
• Uniprot ID: -
• Organism: Pseudomonas aeruginosa strain F006
• Function: ssDNA transport through the inner membrane (predicted from homology) DNA binding and uptake

Genomic Context

Location: 4899979..4912204

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
PCP57_RS22780 (PCP57_22780)	murB	4900369..4901388 (-)	1020	WP_003124431.1	UDP-N-acetylmuramate dehydrogenase	-
PCP57_RS22785 (PCP57_22785)	-	4901385..4901849 (-)	465	WP_003091154.1	low molecular weight protein-tyrosine-phosphatase	-
PCP57_RS22790 (PCP57_22790)	kdsB	4901849..4902613 (-)	765	WP_058179037.1	3-deoxy-manno-octulosonate cytidylyltransferase	-
PCP57_RS22795 (PCP57_22795)	-	4902613..4902798 (-)	186	WP_003091157.1	Trm112 family protein	-
PCP57_RS22800 (PCP57_22800)	lpxK	4902836..4903834 (-)	999	WP_058179038.1	tetraacyldisaccharide 4'-kinase	-
PCP57_RS22805 (PCP57_22805)	-	4903834..4904274 (-)	441	WP_003091161.1	ExbD/TolR family protein	-
PCP57_RS22810 (PCP57_22810)	exbB	4904271..4904906 (-)	636	WP_003091163.1	MotA/TolQ/ExbB proton channel family protein	Machinery gene
PCP57_RS22815 (PCP57_22815)	comA	4904979..4907204 (-)	2226	WP_058179039.1	DNA internalization-related competence protein ComEC/Rec2	Machinery gene
PCP57_RS22820 (PCP57_22820)	-	4907335..4907868 (+)	534	WP_003091165.1	DUF2062 domain-containing protein	-
PCP57_RS22825 (PCP57_22825)	-	4907956..4909200 (-)	1245	WP_033975958.1	lipoprotein-releasing ABC transporter permease subunit	-
PCP57_RS22830 (PCP57_22830)	lolD	4909270..4909953 (-)	684	WP_003091168.1	lipoprotein-releasing ABC transporter ATP-binding protein LolD	-
PCP57_RS22835 (PCP57_22835)	-	4909946..4911196 (-)	1251	WP_003091170.1	lipoprotein-releasing ABC transporter permease subunit	-
PCP57_RS22840 (PCP57_22840)	-	4911299..4911898 (+)	600	WP_058179040.1	PilZ domain-containing protein	-

Sequence

Protein

• Length: 741 a.a.
• Molecular weight: 79994.63 Da
• Isoelectric Point: 10.5155

>NTDB_id=771354 PCP57_RS22815 WP_058179039.1 4904979..4907204(-) (comA) [Pseudomonas aeruginosa strain F006]
MRLGLPALAAGLLALRFLAELPSVGWLLGMAAAGLLLLFGRLYWLGLFLLGFAWACGSAQVALDGRLAAELDGRTLWLEG
RVVDLPASGEGITRFRLEEVSGARGVLLPERLRLSWRGAPPLMGGERWRLAVTLKRPRGLVNAAGFDYEAWLLGQRVGAV
GTVKAGQRLQPASGLDAWRDAWRQRLLAVDAQGRGAALAALVLGDGSGLSAAEWRMFQDTGTVHLMVISGSHISLLAGML
YGLVAALHRLGCWPRRLPWLPCACALGLLGAWSYGLMAGFEVPVRRACLMVSLALVWRLRFRHLGLLTPLLGTLVLVLLV
EPLASLQAGFWLSFLAVALLLWLFAGRLGRWRWWAAWGRAQWGMALGLAMPLLALGLPLSLSGALANLLAVPWIELLVVP
PALAGSLLLWVPGLGEGLLRAAGVSLDLLFRALGLLAGLAEAWQPPAAAAWSVALGMLGALCWLAPAGLPLRALGAALLL
PALLPSSPPVEWGRAEVRVLDVGQGLAVLVRTREHALLYDSGARQGALDMGERVVVPVLRSLDLRRLDGLLLSHADNDHA
GGAPTVASRFPPGWLVSGEPARLPSPLFADSCDERRWSWDGVVFEQWAWAQAGDSNDRSCVLRVEADGELLLLTGDMSRA
AEHAWLARQADPRVDWLLAPHHGSRSSSGVAFVLRTRPRHVLVSRGWRNAFGHPHGEVMERYARVAAQVHDTARDGALTF
LLGSRGSARRERDSAHFWREK

Nucleotide

• Length: 2226 bp

>NTDB_id=771354 PCP57_RS22815 WP_058179039.1 4904979..4907204(-) (comA) [Pseudomonas aeruginosa strain F006]
ATGCGCCTGGGATTGCCAGCCCTCGCCGCGGGGCTGCTGGCCCTGCGCTTCCTGGCGGAATTGCCGTCGGTCGGCTGGCT
GCTGGGCATGGCCGCCGCCGGACTGTTGCTGCTGTTCGGCCGGCTGTACTGGCTGGGCTTGTTCCTGCTCGGGTTCGCCT
GGGCCTGCGGCTCGGCGCAAGTCGCCCTGGACGGACGCCTGGCCGCCGAGCTGGATGGTCGCACCCTTTGGCTGGAGGGG
CGTGTGGTCGATCTGCCGGCGAGCGGCGAGGGCATCACGCGCTTCCGGCTGGAGGAGGTCAGTGGCGCGCGGGGCGTCCT
TCTTCCCGAGCGTCTGCGCCTGAGCTGGCGTGGTGCGCCGCCGCTGATGGGCGGCGAACGCTGGCGCCTGGCGGTGACCC
TGAAACGCCCTCGCGGCCTGGTGAACGCGGCGGGTTTCGACTACGAAGCCTGGTTGTTGGGGCAGCGGGTCGGTGCCGTT
GGAACGGTGAAGGCGGGCCAGCGCCTGCAGCCGGCCAGTGGCCTGGATGCCTGGCGCGACGCCTGGCGCCAGCGCCTCCT
GGCGGTCGACGCGCAGGGGCGCGGCGCCGCCCTGGCGGCGCTGGTGCTGGGGGATGGCTCTGGATTGAGCGCGGCCGAGT
GGCGCATGTTCCAGGACACCGGCACCGTGCATCTGATGGTCATCTCCGGTTCGCATATCTCGTTGCTGGCGGGGATGCTC
TATGGCCTGGTGGCGGCCTTGCATCGCCTGGGCTGCTGGCCGCGGCGCCTGCCCTGGCTGCCCTGTGCCTGCGCCCTGGG
TTTGCTTGGTGCCTGGAGCTACGGGTTGATGGCGGGCTTCGAGGTCCCGGTGCGGCGTGCCTGCCTGATGGTCAGCCTGG
CGCTGGTCTGGCGCCTGCGTTTCCGCCACCTGGGCTTGCTGACCCCGCTGCTGGGAACGCTGGTGCTGGTCTTGCTGGTC
GAGCCGCTGGCCAGCCTGCAGGCGGGGTTCTGGCTGTCGTTCCTGGCGGTTGCCCTGCTGCTCTGGCTGTTCGCCGGGCG
CCTTGGGCGCTGGCGCTGGTGGGCGGCCTGGGGGCGTGCGCAGTGGGGGATGGCGCTGGGGCTGGCGATGCCGCTGCTGG
CGCTGGGCCTGCCGTTGAGCCTGAGCGGAGCGCTGGCCAACCTGCTGGCGGTACCTTGGATCGAACTGCTGGTAGTGCCC
CCGGCCCTGGCGGGGAGCCTGCTGCTGTGGGTACCCGGGCTGGGCGAGGGGCTGCTTCGCGCCGCTGGCGTTTCGCTGGA
CCTGCTGTTTCGTGCGCTTGGCCTGCTGGCGGGCCTGGCCGAGGCCTGGCAGCCACCCGCCGCAGCGGCCTGGAGCGTAG
CGCTGGGCATGCTCGGCGCGCTCTGCTGGCTGGCGCCGGCTGGCTTGCCGTTGCGTGCCCTCGGTGCCGCGTTGCTACTG
CCGGCGTTGTTGCCGTCATCGCCGCCTGTCGAATGGGGGCGGGCGGAAGTGCGGGTGCTGGACGTCGGCCAGGGGCTGGC
CGTGCTGGTGCGTACCCGGGAGCATGCCTTGCTCTATGACAGCGGTGCGCGGCAGGGGGCGCTCGACATGGGCGAGCGGG
TGGTGGTGCCGGTGCTGCGCAGCCTGGACCTGCGGCGCCTGGACGGCCTGTTGCTGAGTCATGCCGACAACGACCATGCA
GGCGGTGCTCCTACGGTCGCTTCCCGATTCCCGCCGGGTTGGCTGGTCAGCGGCGAACCCGCGCGCCTGCCTTCGCCGTT
GTTCGCGGACAGCTGTGACGAGCGGCGCTGGTCCTGGGATGGCGTGGTTTTCGAACAGTGGGCATGGGCGCAGGCCGGCG
ACAGCAACGACCGCTCCTGCGTGCTGAGGGTCGAGGCCGATGGCGAACTCCTGCTGCTGACCGGGGACATGTCGCGTGCG
GCCGAGCATGCCTGGCTGGCGCGACAGGCCGATCCGCGGGTCGACTGGTTGCTGGCGCCGCACCACGGCAGCCGCAGCTC
CTCCGGAGTCGCCTTCGTGTTGCGTACGCGGCCTCGCCATGTGCTGGTCTCGCGAGGTTGGCGCAACGCCTTCGGCCATC
CCCATGGCGAAGTGATGGAGCGTTACGCGAGGGTCGCCGCGCAGGTCCACGACACGGCACGCGACGGTGCCCTGACGTTT
CTCCTCGGAAGCCGTGGCAGTGCACGCCGGGAGCGTGATTCGGCGCACTTCTGGCGGGAAAAATGA

Domains

Predicted by InterproScan.

• Competence protein (Competence) (201-464)

• Domain of unknown function (DUF4131) (DUF4131) (21-168)

• Metallo-beta-lactamase superfamily (Lactamase_B) (501-666)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comA	Pseudomonas stutzeri DSM 10701	58.669	97.301	0.571
comA	Ralstonia pseudosolanacearum GMI1000	35.611	100	0.366