Detailed information    

insolico Bioinformatically predicted

Overview

Name   disA   Type   Machinery gene
Locus tag   QPK52_RS11100 Genome accession   NZ_CP127170
Coordinates   2464307..2465407 (+) Length   366 a.a.
NCBI ID   WP_410537283.1    Uniprot ID   -
Organism   Streptomyces sp. KL2     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context

Location: 2459307..2470407
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QPK52_RS11085 - 2459936..2460841 (+) 906 WP_410537280.1 hypothetical protein -
  QPK52_RS11090 - 2460885..2462519 (-) 1635 WP_410537281.1 BACON domain-containing protein -
  QPK52_RS11095 radA/sms 2462780..2464258 (+) 1479 WP_410537282.1 DNA repair protein RadA Machinery gene
  QPK52_RS11100 disA 2464307..2465407 (+) 1101 WP_410537283.1 DNA integrity scanning diadenylate cyclase DisA Machinery gene
  QPK52_RS11105 - 2465531..2466361 (-) 831 WP_410537284.1 hypothetical protein -
  QPK52_RS11110 - 2466588..2467229 (+) 642 WP_410537285.1 phosphatase PAP2 family protein -
  QPK52_RS11115 - 2467379..2468341 (+) 963 WP_410537286.1 A/G-specific adenine glycosylase -
  QPK52_RS11120 - 2468506..2468955 (-) 450 WP_410537287.1 VOC family protein -

Sequence

Protein


Download         Length: 366 a.a.        Molecular weight: 39614.32 Da        Isoelectric Point: 5.0025

>NTDB_id=771310 QPK52_RS11100 WP_410537283.1 2464307..2465407(+) (disA) [Streptomyces sp. KL2]
MAANDRAATGADGLLRASLSAVAPGTALRDGLERVLRGNTGGLIVLGMDKTVEALCSGGFVLDVEFSATRLRELCKLDGA
LILDRDITKIVRAGVQLVPDASIPTEETGTRHRTAQRVSIQTGFPVVSVSQSMRLIALYVDGQRRVLEDSAAILSRANQA
LATLERYKLRLDEVAGTLSALEIEDLVTVRDVSAVSQRLEMVRRIATEIAEYVVELGTDGRLLSLQLDELIAGVEPEREL
VARDYVPEPTAKRSRTVTEALTELDRLTHTELLELPTVAKALGYSGSPETLDSAVSPRGYRLLAKVPRLPNTVIERLVEH
FGGLQKLLAASVDDLQTVDGVGEARARSVREGLSRLAESSILERYV

Nucleotide


Download         Length: 1101 bp        

>NTDB_id=771310 QPK52_RS11100 WP_410537283.1 2464307..2465407(+) (disA) [Streptomyces sp. KL2]
GTGGCAGCCAACGACCGGGCAGCAACCGGCGCCGACGGCCTGTTGCGCGCCTCACTGAGCGCGGTCGCGCCTGGTACGGC
CCTGCGCGACGGCCTGGAGCGCGTCCTGCGGGGGAACACCGGCGGGCTCATCGTCCTGGGCATGGACAAGACCGTCGAGG
CGCTGTGCTCCGGCGGTTTCGTGCTGGACGTGGAGTTCAGCGCGACGCGGCTGCGCGAGCTGTGCAAGCTGGACGGCGCG
CTGATCCTCGACAGGGACATCACCAAGATCGTGCGGGCGGGCGTGCAGCTCGTGCCGGACGCCTCGATCCCCACGGAGGA
GACGGGCACCCGGCACCGCACCGCGCAGCGGGTGTCGATCCAGACCGGTTTCCCGGTGGTGTCGGTGAGCCAGTCGATGC
GGCTGATCGCGCTGTACGTGGACGGCCAGCGGCGCGTGCTGGAGGACTCGGCGGCGATCCTGTCCCGGGCCAACCAGGCG
CTGGCGACGCTGGAGCGGTACAAGCTTCGCCTGGACGAGGTGGCGGGCACGCTCTCCGCGCTGGAGATCGAGGACCTGGT
GACGGTCCGGGACGTCTCCGCGGTGTCGCAGCGCCTGGAGATGGTGCGGCGGATCGCCACGGAGATCGCCGAGTACGTGG
TGGAACTGGGCACGGACGGGCGGCTGCTCTCCCTCCAGCTCGACGAGCTGATCGCGGGTGTGGAGCCCGAACGCGAGCTG
GTCGCCCGCGACTACGTGCCCGAGCCGACCGCCAAGCGGTCCCGCACCGTCACCGAGGCGCTGACCGAGCTGGACCGGCT
GACCCACACCGAGCTGCTCGAACTGCCCACGGTGGCCAAGGCGTTGGGGTACAGCGGATCGCCGGAGACACTGGACTCGG
CCGTCTCGCCGCGCGGCTACCGCCTGCTGGCGAAGGTGCCCCGGCTGCCGAACACCGTGATCGAGCGGCTGGTCGAGCAC
TTCGGCGGACTGCAGAAGCTGCTGGCCGCGAGCGTGGACGACCTGCAGACCGTCGACGGGGTGGGCGAGGCGCGGGCCAG
GTCGGTCCGCGAGGGCCTGTCGCGGCTGGCGGAGTCGTCGATCCTGGAGCGGTACGTCTGA

Domains

Predicted by InterProScan.

Helix-hairpin-helix motif (HHH_2)

(315-351)

DisA bacterial checkpoint controller nucleotide-binding (DAC)

(30-143)

DisA bacterial checkpoint controller linker region (DisA-linker)

(147-289)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  disA Bacillus subtilis subsp. subtilis str. 168

47.143

95.628

0.451