Detailed information NTG0768000

Bioinformatically predicted

Overview

• Name: comA
• Type: Machinery gene
• Locus tag: OZ430_RS08010
• Genome accession: NZ_CP115039
• Coordinates: 1721148..1723373 (+)
• Length: 741 a.a.
• NCBI ID: WP_375666322.1
• Uniprot ID: -
• Organism: Stutzerimonas kunmingensis strain LP1
• Function: ssDNA transport through the inner membrane (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1716148..1728373

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
OZ430_RS07980 (OZ430_07980)	-	1716294..1716602 (-)	309	WP_014820912.1	hypothetical protein	-
OZ430_RS07985 (OZ430_07985)	-	1716606..1717241 (-)	636	WP_213573852.1	PilZ domain-containing protein	-
OZ430_RS07990 (OZ430_07990)	-	1717278..1718525 (+)	1248	WP_375666319.1	lipoprotein-releasing ABC transporter permease subunit	-
OZ430_RS07995 (OZ430_07995)	lolD	1718533..1719231 (+)	699	WP_003299646.1	lipoprotein-releasing ABC transporter ATP-binding protein LolD	-
OZ430_RS08000 (OZ430_08000)	-	1719231..1720475 (+)	1245	WP_031298331.1	lipoprotein-releasing ABC transporter permease subunit	-
OZ430_RS08005 (OZ430_08005)	-	1720482..1720997 (-)	516	WP_003299644.1	DUF2062 domain-containing protein	-
OZ430_RS08010 (OZ430_08010)	comA	1721148..1723373 (+)	2226	WP_375666322.1	DNA internalization-related competence protein ComEC/Rec2	Machinery gene
OZ430_RS08015 (OZ430_08015)	-	1723445..1724077 (+)	633	WP_375666324.1	MotA/TolQ/ExbB proton channel family protein	-
OZ430_RS08020 (OZ430_08020)	-	1724074..1724502 (+)	429	WP_014820907.1	biopolymer transporter ExbD	-
OZ430_RS08025 (OZ430_08025)	lpxK	1724502..1725506 (+)	1005	WP_041014487.1	tetraacyldisaccharide 4'-kinase	-
OZ430_RS08030 (OZ430_08030)	-	1725552..1725737 (+)	186	WP_003299639.1	Trm112 family protein	-
OZ430_RS08035 (OZ430_08035)	kdsB	1725734..1726498 (+)	765	WP_313408664.1	3-deoxy-manno-octulosonate cytidylyltransferase	-
OZ430_RS08040 (OZ430_08040)	-	1726500..1726964 (+)	465	WP_023446727.1	low molecular weight protein-tyrosine-phosphatase	-
OZ430_RS08045 (OZ430_08045)	murB	1726961..1727980 (+)	1020	WP_375666328.1	UDP-N-acetylmuramate dehydrogenase	-

Sequence

Protein

• Length: 741 a.a.
• Molecular weight: 80921.32 Da
• Isoelectric Point: 9.9242

>NTDB_id=768000 OZ430_RS08010 WP_375666322.1 1721148..1723373(+) (comA) [Stutzerimonas kunmingensis strain LP1]
MRTWMLALAAGLVLPRFLPALPSVWILCVLGVLGGLLLSRRRWASSGLLLLGFAWACWQCQSAIDDRLPVSQDGRTYWIQ
GTVSGLPSSTGDVVRFELEDIESRHAGLPSKVRLSWYGGPQVRAGERWRLAARLKRPRGLVNPHAFDYEAWLLARRIGAT
GSVKAGERLFAPHSVNSWRDRLRLRLMEVSASGRQGAIAALVVGDDSGLSREDWQVLQDTGTVHLMVISGQHIGMLAGLL
YGLVALAARWGFWPSRWPWLPCACALALAGALSYGWLAGFDVPVRRACLMVAVVLLWRLRFRHLGVWQPLLLALNGVLLV
DPLVSLQPGFWLSFGAVAVLALAFSGRLGRWKWWATLARAQWAASLGLLPLLLTLGLPVSASGPLANLIAVPWVSLTVPF
ALLGTLLLPLGAIGETLLWLVGTSLALLFELLSAMAAWQPAWLAVGIPIWALLMIGLGVLLMLLPSGVPVRALGLVLLAP
LVHPPYSEVAEGRAQVSVLDVGQGLSVLVRTREHALLYDAGPRQGDFDTGERVVFPSLRSLGVKRLDILLLSHADNDHSG
GAQAIRRLLPVARTVSGEPQRHATDLNAKPCENGAEWRWNGVRFSLWQWQAARESNQTSCVLLVEANGERVLLTGDIDQA
AEQALLLSGQDVKAQWLLLPHHGSRSSSSEPFLRAVEPSAALISRSLHNAFGHPHPTVTARLEASAIDVYDTAWHGAIRI
DLGDFSVAEIQRAERRFWREK

Nucleotide

• Length: 2226 bp

>NTDB_id=768000 OZ430_RS08010 WP_375666322.1 1721148..1723373(+) (comA) [Stutzerimonas kunmingensis strain LP1]
ATGCGCACATGGATGTTGGCGCTCGCGGCAGGCCTCGTCTTGCCCCGTTTCTTACCGGCTTTGCCCTCTGTCTGGATCTT
GTGCGTGCTTGGCGTGCTGGGGGGCTTGCTGCTTTCGCGTCGGCGCTGGGCGTCGTCCGGGTTGCTTCTCCTCGGGTTCG
CCTGGGCATGCTGGCAGTGCCAGAGTGCCATTGATGATCGCCTGCCCGTTTCGCAAGATGGCCGGACATACTGGATCCAG
GGGACGGTCAGTGGATTGCCCTCCAGCACGGGCGATGTCGTGCGCTTCGAGTTGGAGGATATCGAGTCGAGGCATGCAGG
GTTGCCGTCGAAGGTGCGTCTGTCCTGGTACGGCGGTCCGCAAGTGCGGGCCGGCGAGCGCTGGCGGCTTGCGGCTCGAC
TGAAACGTCCGCGTGGCTTGGTCAATCCGCATGCGTTCGACTACGAAGCCTGGTTGCTGGCGCGTCGCATTGGCGCGACC
GGTTCGGTCAAGGCGGGAGAGCGCCTCTTCGCGCCGCACTCCGTGAATAGTTGGCGCGACCGCTTGAGGCTCCGTCTGAT
GGAGGTCTCCGCGTCCGGTCGACAAGGCGCGATCGCGGCACTGGTGGTCGGTGATGACTCCGGCCTGAGTCGTGAGGATT
GGCAGGTGTTGCAGGACACCGGCACGGTGCACCTGATGGTCATATCCGGACAGCACATCGGCATGCTGGCTGGCTTGCTA
TACGGACTGGTTGCGCTAGCAGCTCGATGGGGCTTCTGGCCCAGCCGTTGGCCCTGGCTTCCATGCGCATGCGCGTTGGC
TCTCGCTGGTGCGCTTTCCTATGGATGGCTTGCGGGGTTCGATGTGCCGGTGCGTCGTGCGTGCCTCATGGTCGCGGTGG
TCCTGCTCTGGCGCTTGCGCTTTCGTCATCTGGGTGTCTGGCAGCCGCTGTTGCTGGCGCTGAATGGCGTCCTGCTGGTC
GACCCCCTGGTCTCGTTGCAACCAGGCTTCTGGCTCTCATTCGGGGCCGTTGCGGTGCTCGCGCTGGCGTTCTCCGGTCG
GCTCGGCCGATGGAAGTGGTGGGCGACGCTGGCGCGCGCCCAATGGGCAGCTTCTCTCGGCCTGCTGCCTCTGTTACTGA
CGCTGGGACTGCCGGTCAGCGCCAGCGGGCCTTTGGCCAATCTGATTGCCGTACCCTGGGTAAGCCTCACCGTTCCCTTC
GCGCTGCTCGGTACGTTGCTTCTGCCGTTGGGCGCTATCGGCGAGACGCTACTCTGGTTGGTCGGCACCTCGCTGGCGCT
GCTGTTCGAGCTGCTGTCCGCCATGGCTGCCTGGCAACCCGCCTGGCTGGCGGTCGGTATACCCATCTGGGCCTTGCTGA
TGATTGGGCTGGGTGTGCTGTTGATGTTATTGCCGTCAGGTGTGCCGGTGCGTGCGCTCGGACTGGTGCTCCTGGCGCCG
TTGGTGCATCCCCCGTATTCCGAAGTAGCCGAAGGACGGGCGCAGGTCTCGGTGCTGGATGTGGGGCAGGGGCTTTCGGT
ACTGGTGCGGACCCGGGAGCACGCGTTGCTCTACGATGCGGGACCGAGGCAGGGTGATTTCGATACCGGCGAGCGTGTCG
TGTTCCCGTCGCTGCGAAGCCTGGGCGTGAAGAGGCTGGACATACTGCTGCTGAGCCATGCGGATAACGATCATTCCGGT
GGCGCTCAGGCGATCCGTCGACTGCTTCCGGTCGCGCGGACCGTCAGTGGGGAGCCGCAACGACATGCGACCGATCTGAA
TGCCAAGCCCTGTGAAAACGGTGCCGAGTGGCGGTGGAACGGCGTGCGTTTCAGTCTCTGGCAATGGCAGGCGGCCCGGG
AAAGCAATCAGACGTCATGCGTTCTGCTGGTCGAGGCCAATGGCGAACGGGTTCTGCTTACCGGCGATATCGATCAGGCC
GCGGAGCAGGCTTTGCTGCTCAGCGGACAGGACGTAAAGGCGCAGTGGTTGCTATTGCCTCATCACGGCAGCCGCAGCTC
ATCGTCGGAGCCATTCCTGCGAGCGGTGGAACCGAGCGCCGCGCTGATCTCGCGCAGCCTGCACAACGCTTTCGGTCATC
CTCATCCGACTGTGACCGCTCGCCTCGAAGCGTCCGCAATCGACGTTTACGACACCGCCTGGCACGGCGCGATCCGCATC
GATCTCGGCGATTTCTCGGTGGCGGAGATACAGCGTGCGGAACGTCGGTTCTGGCGGGAAAAATGA

Domains

Predicted by InterproScan.

• Metallo-beta-lactamase superfamily (Lactamase_B) (500-683)

• Domain of unknown function (DUF4131) (DUF4131) (22-168)

• Competence protein (Competence) (201-464)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comA	Pseudomonas stutzeri DSM 10701	66.574	96.896	0.645
comA	Ralstonia pseudosolanacearum GMI1000	36.623	100	0.381