Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   OZ430_RS01545 Genome accession   NZ_CP115039
Coordinates   323999..324406 (+) Length   135 a.a.
NCBI ID   WP_003282729.1    Uniprot ID   -
Organism   Stutzerimonas kunmingensis strain LP1     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 318999..329406
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  OZ430_RS01515 (OZ430_01515) - 319172..320188 (-) 1017 WP_312914922.1 aspartate carbamoyltransferase catalytic subunit -
  OZ430_RS01520 (OZ430_01520) pyrR 320236..320748 (-) 513 WP_023446072.1 bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR -
  OZ430_RS01525 (OZ430_01525) ruvX 320770..321198 (-) 429 WP_042927200.1 Holliday junction resolvase RuvX -
  OZ430_RS01530 (OZ430_01530) - 321195..321764 (-) 570 WP_090520828.1 YqgE/AlgH family protein -
  OZ430_RS01535 (OZ430_01535) - 321831..322724 (-) 894 WP_090520830.1 energy transducer TonB -
  OZ430_RS01540 (OZ430_01540) gshB 322812..323762 (-) 951 WP_090520831.1 glutathione synthase -
  OZ430_RS01545 (OZ430_01545) pilG 323999..324406 (+) 408 WP_003282729.1 twitching motility response regulator PilG Regulator
  OZ430_RS01550 (OZ430_01550) pilH 324450..324815 (+) 366 WP_003303135.1 twitching motility response regulator PilH -
  OZ430_RS01555 (OZ430_01555) - 324857..325393 (+) 537 WP_023446068.1 chemotaxis protein CheW -
  OZ430_RS01560 (OZ430_01560) - 325469..327517 (+) 2049 WP_090520835.1 methyl-accepting chemotaxis protein -
  OZ430_RS01565 (OZ430_01565) - 327579..328445 (+) 867 WP_031298039.1 protein-glutamate O-methyltransferase CheR -

Sequence

Protein


Download         Length: 135 a.a.        Molecular weight: 14826.22 Da        Isoelectric Point: 7.2439

>NTDB_id=767994 OZ430_RS01545 WP_003282729.1 323999..324406(+) (pilG) [Stutzerimonas kunmingensis strain LP1]
MEQHSEGLKVMVIDDSKTIRRTAETLLKKVGCDVITAVDGFDALAKIADTHPRIIFVDIMMPRLDGYQTCALIKNNSSFK
STPVIMLSSKDGLFDKAKGRIVGSDQYLTKPFSKEELLGAIKAHVPDFAPVEQAS

Nucleotide


Download         Length: 408 bp        

>NTDB_id=767994 OZ430_RS01545 WP_003282729.1 323999..324406(+) (pilG) [Stutzerimonas kunmingensis strain LP1]
ATGGAACAGCACTCCGAGGGCTTGAAGGTCATGGTGATCGACGATTCGAAAACGATTCGTCGCACTGCTGAAACCCTGCT
GAAGAAAGTAGGTTGCGATGTCATCACCGCTGTGGACGGTTTCGATGCGCTCGCCAAGATTGCGGATACTCATCCCCGCA
TCATCTTTGTCGATATTATGATGCCCAGGCTGGACGGTTATCAGACCTGTGCGTTGATCAAGAACAACAGTTCCTTCAAG
TCGACGCCGGTGATCATGCTGTCTTCCAAAGATGGCCTGTTCGACAAGGCCAAAGGGCGTATTGTCGGATCCGATCAATA
CCTTACCAAGCCGTTCAGCAAAGAAGAGCTGCTCGGTGCGATCAAGGCGCATGTCCCTGATTTCGCACCGGTGGAGCAAG
CATCCTGA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(10-121)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

76

92.593

0.704
  vicR Streptococcus mutans UA159

42.857

93.333

0.4