Detailed information    

insolico Bioinformatically predicted

Overview


Name   sxy/tfoX   Type   Regulator
Locus tag   H7R61_RS08860 Genome accession   NZ_AP022126
Coordinates   1848601..1849227 (+) Length   208 a.a.
NCBI ID   WP_014883254.1    Uniprot ID   A0A2W0GP96
Organism   Enterobacter cloacae strain WP5-S18-CRE-02     
Function   positive regulator of competence gene (predicted from homology)   
Competence regulation

Genomic Context


Location: 1843601..1854227
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  H7R61_RS08840 (WP5S18C02_17320) - 1843999..1845759 (-) 1761 WP_014883250.1 AAA family ATPase -
  H7R61_RS08845 (WP5S18C02_17330) matP 1845946..1846398 (+) 453 WP_023332611.1 macrodomain Ter protein MatP -
  H7R61_RS08850 (WP5S18C02_17340) ompA 1846463..1847518 (-) 1056 WP_014883252.1 porin OmpA -
  H7R61_RS08855 (WP5S18C02_17350) sulA 1847874..1848383 (-) 510 WP_014883253.1 SOS-induced cell division inhibitor SulA -
  H7R61_RS08860 (WP5S18C02_17360) sxy/tfoX 1848601..1849227 (+) 627 WP_014883254.1 TfoX/Sxy family DNA transformation protein Regulator
  H7R61_RS08865 (WP5S18C02_17370) yccS 1849184..1851346 (-) 2163 WP_014883255.1 YccS family putative transporter -
  H7R61_RS08870 (WP5S18C02_17380) - 1851366..1851812 (-) 447 WP_014883256.1 YccF domain-containing protein -
  H7R61_RS08875 (WP5S18C02_17390) helD 1851936..1853990 (+) 2055 WP_014883257.1 DNA helicase IV -

Sequence


Protein


Download         Length: 208 a.a.        Molecular weight: 23928.55 Da        Isoelectric Point: 9.0691

>NTDB_id=76794 H7R61_RS08860 WP_014883254.1 1848601..1849227(+) (sxy/tfoX) [Enterobacter cloacae strain WP5-S18-CRE-02]
MKKISYERIYQSQEYLSPLGEIHHRALFGGYTLAVDDAVFAMVSDGELYLRACEESAKYCVKNAASFLTLMKRGRPVLLN
YYRVDDGLWQDRERLLQLSSFALNAARKERCQRHQRNRLKDLPNLTFQLEVLLFEAGITNEETLRALGARECWLKMRAKN
RALGIKVLFALEGAIEGLHEAALPAGIRRELTEWFNALPEPQKNHSSR

Nucleotide


Download         Length: 627 bp        

>NTDB_id=76794 H7R61_RS08860 WP_014883254.1 1848601..1849227(+) (sxy/tfoX) [Enterobacter cloacae strain WP5-S18-CRE-02]
ATGAAAAAGATATCTTATGAACGGATTTATCAATCCCAGGAATACCTCTCACCGCTAGGAGAAATTCATCATCGCGCCCT
GTTCGGTGGCTATACCCTGGCGGTAGATGACGCGGTTTTTGCCATGGTGTCAGATGGCGAGCTGTACCTTCGCGCGTGTG
AAGAAAGCGCAAAATACTGTGTAAAAAATGCCGCCTCTTTTTTGACGTTGATGAAACGAGGCCGCCCGGTACTTCTCAAC
TATTACCGTGTCGATGATGGACTGTGGCAAGACAGGGAACGGCTGCTTCAGCTCTCCTCTTTCGCGCTCAATGCGGCGAG
GAAAGAGCGCTGTCAGCGCCATCAACGAAACCGGCTTAAAGATCTGCCAAACCTGACTTTTCAGCTTGAGGTATTACTTT
TCGAAGCGGGCATTACTAACGAAGAGACGCTGCGGGCGCTGGGTGCCAGGGAGTGCTGGTTGAAAATGCGGGCTAAAAAT
AGGGCACTCGGTATTAAAGTGCTCTTTGCCCTTGAGGGGGCTATTGAGGGTTTGCATGAGGCGGCACTCCCGGCAGGCAT
TCGCCGGGAGTTGACGGAGTGGTTTAATGCGCTGCCTGAGCCACAGAAGAATCACTCCTCCAGGTAG


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A2W0GP96

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  sxy/tfoX Escherichia coli BW25113 strain K-12

57.635

97.596

0.562


Multiple sequence alignment