Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   O6P33_RS01340 Genome accession   NZ_CP114976
Coordinates   268580..268987 (-) Length   135 a.a.
NCBI ID   WP_269818462.1    Uniprot ID   A0AAE9VSE2
Organism   Denitrificimonas caeni strain CE14     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 263580..273987
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  O6P33_RS01320 (O6P33_01320) - 264479..265342 (-) 864 WP_269818458.1 CheR family methyltransferase -
  O6P33_RS01325 (O6P33_01325) - 265405..267456 (-) 2052 WP_269818459.1 methyl-accepting chemotaxis protein -
  O6P33_RS01330 (O6P33_01330) - 267577..268116 (-) 540 WP_269818460.1 chemotaxis protein CheW -
  O6P33_RS01335 (O6P33_01335) pilH 268157..268522 (-) 366 WP_269818461.1 twitching motility response regulator PilH -
  O6P33_RS01340 (O6P33_01340) pilG 268580..268987 (-) 408 WP_269818462.1 twitching motility response regulator PilG Regulator
  O6P33_RS01345 (O6P33_01345) gshB 269232..270188 (+) 957 WP_269818463.1 glutathione synthase -
  O6P33_RS01350 (O6P33_01350) - 270296..271195 (+) 900 WP_269818464.1 energy transducer TonB -
  O6P33_RS01355 (O6P33_01355) - 271266..271832 (+) 567 WP_269818465.1 YqgE/AlgH family protein -
  O6P33_RS01360 (O6P33_01360) ruvX 271829..272260 (+) 432 WP_269818466.1 Holliday junction resolvase RuvX -
  O6P33_RS01365 (O6P33_01365) pyrR 272290..272799 (+) 510 WP_269819439.1 bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR -
  O6P33_RS01370 (O6P33_01370) - 272810..273820 (+) 1011 WP_269818467.1 aspartate carbamoyltransferase catalytic subunit -

Sequence

Protein


Download         Length: 135 a.a.        Molecular weight: 14786.19 Da        Isoelectric Point: 7.2441

>NTDB_id=767633 O6P33_RS01340 WP_269818462.1 268580..268987(-) (pilG) [Denitrificimonas caeni strain CE14]
MEHKSEGLKVMVIDDSKTIRRTAETLLKKVGCEVITAVDGFDALAKIADTHPDIIFVDIMMPRLDGYQTCALIKNNSAFR
STPVIMLSSKDGLFDKAKGRIVGSDQYLTKPFSKEELIGAIKTHVPAFTPVESAS

Nucleotide


Download         Length: 408 bp        

>NTDB_id=767633 O6P33_RS01340 WP_269818462.1 268580..268987(-) (pilG) [Denitrificimonas caeni strain CE14]
ATGGAACATAAATCAGAAGGTTTAAAGGTAATGGTGATTGACGACTCAAAAACGATTCGTCGCACAGCCGAAACCTTGCT
TAAGAAAGTTGGTTGTGAAGTGATCACAGCCGTGGATGGTTTTGACGCGCTCGCAAAAATTGCAGATACACATCCAGATA
TTATTTTTGTTGATATTATGATGCCGCGTTTAGACGGCTATCAAACTTGTGCATTGATCAAAAACAATAGTGCTTTTCGA
TCAACGCCAGTGATTATGCTGTCTTCCAAAGATGGTTTGTTTGATAAAGCCAAGGGCCGCATTGTTGGTTCAGATCAGTA
TTTAACGAAACCGTTTAGTAAAGAAGAGCTGATTGGCGCGATTAAAACGCATGTGCCAGCCTTTACGCCAGTAGAGAGTG
CTTCTTAA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(10-121)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

75.591

94.074

0.711
  vicR Streptococcus mutans UA159

42.063

93.333

0.393