NTDB

Overview

Name	med	Type	Regulator
Locus tag	O6U12_RS11190	Genome accession	NZ_CP114899
Coordinates	2058775..2059728 (-)	Length	317 a.a.
NCBI ID	WP_014476425.1	Uniprot ID	A0A0K6M9I2
Organism	Bacillus subtilis strain
Function	regulation of regulators (predicted from homology) Competence regulation

Genomic Context

Location: 2053775..2064728

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
O6U12_RS11160 (O6U12_11160)	appD	2053899..2054885 (-)	987	WP_003232965.1	oligopeptide ABC transporter ATP-binding protein AppD	-
O6U12_RS11165 (O6U12_11165)	yjaZ	2055075..2055860 (-)	786	WP_041056492.1	DUF2268 domain-containing protein	-
O6U12_RS11170 (O6U12_11170)	fabF	2055936..2057177 (-)	1242	WP_003244890.1	beta-ketoacyl-ACP synthase II	-
O6U12_RS11175 (O6U12_11175)	fabH	2057200..2058138 (-)	939	WP_003232971.1	beta-ketoacyl-ACP synthase III	-
O6U12_RS11180 (O6U12_11180)	yjzB	2058303..2058539 (+)	237	WP_080333447.1	spore coat protein YjzB	-
O6U12_RS11185 (O6U12_11185)	comZ	2058569..2058760 (-)	192	WP_003224559.1	ComG operon transcriptional repressor ComZ	Regulator
O6U12_RS11190 (O6U12_11190)	med	2058775..2059728 (-)	954	WP_014476425.1	transcriptional regulator Med	Regulator
O6U12_RS11195 (O6U12_11195)	-	2059819..2060376 (-)	558	WP_017695676.1	hypothetical protein	-
O6U12_RS11200 (O6U12_11200)	-	2060458..2061192 (-)	735	WP_041340422.1	hypothetical protein	-
O6U12_RS11205 (O6U12_11205)	yjzD	2061441..2061626 (+)	186	WP_003245236.1	YjzD family protein	-
O6U12_RS11210 (O6U12_11210)	yjzC	2061673..2061852 (-)	180	WP_003245356.1	YjzC family protein	-
O6U12_RS11215 (O6U12_11215)	argF	2061938..2062897 (-)	960	WP_269767450.1	ornithine carbamoyltransferase	-

Sequence

Protein

Download Length: 317 a.a. Molecular weight: 35310.84 Da Isoelectric Point: 4.6031

                                >NTDB_id=767598 O6U12_RS11190 WP_014476425.1 2058775..2059728(-) (med) [Bacillus subtilis strain]

MITRLVMIFSVLLLLSGCGQTPFKGKIEKVGMLFPDTINDLVWGTKGYKGLLNIQSKYNVDVYYKEGVKTEEDIINAIED

FHKRGVNLLYGHGSEYAEVFNLVGEDYPDMEFVISNAKAKADNVTSVHFSGEAMGFFGGMTAAHMSKTNQVGVIASFTWQ

PEVDGFIKGAKYENPDIEVNTKYTDHWDDDTTAVKLYQKMKNEGADVVYPAGDGYNVPVIQQIKKDGLYAIGYVTDQSDL

GENTVLTSTVQNVDKAYEIIAEQFNKGTLEGGDHYYDLNTGVVEMGTFSPLVDKDFQQRIAKLIKTYNKTGELPKNE

Nucleotide

Download Length: 954 bp

                                >NTDB_id=767598 O6U12_RS11190 WP_014476425.1 2058775..2059728(-) (med) [Bacillus subtilis strain]

TTGATCACAAGGCTTGTCATGATCTTTTCTGTCCTCCTTTTATTGAGTGGATGTGGACAAACTCCGTTCAAAGGAAAAAT

TGAGAAGGTCGGCATGCTCTTTCCTGATACGATTAATGACCTCGTATGGGGCACAAAAGGGTATAAAGGATTACTGAATA

TACAATCCAAATACAATGTGGACGTCTATTATAAAGAAGGCGTTAAAACAGAAGAAGATATCATAAATGCGATTGAGGAT

TTTCATAAGAGGGGCGTCAATCTGCTCTACGGCCATGGGAGTGAATATGCTGAGGTGTTTAACTTGGTCGGCGAAGATTA

TCCAGATATGGAATTCGTCATTTCCAATGCGAAAGCGAAAGCTGATAATGTAACGAGTGTCCATTTCAGCGGAGAAGCAA

TGGGCTTTTTTGGAGGAATGACTGCTGCCCATATGTCGAAAACGAATCAGGTCGGTGTAATTGCTTCCTTTACGTGGCAG

CCTGAGGTTGACGGTTTTATCAAAGGGGCCAAGTATGAAAATCCGGATATAGAGGTAAACACGAAATATACGGATCATTG

GGATGATGATACAACAGCAGTAAAGCTTTATCAGAAAATGAAGAACGAAGGCGCGGATGTTGTGTATCCCGCCGGAGACG

GGTATAATGTTCCTGTTATTCAGCAAATCAAAAAAGACGGTCTTTATGCCATTGGCTACGTCACAGATCAATCGGATCTG

GGCGAGAATACTGTATTAACCAGCACGGTGCAAAATGTGGACAAGGCCTATGAAATCATTGCTGAACAATTTAATAAAGG

CACCCTTGAGGGCGGCGATCATTACTACGACCTGAATACGGGAGTCGTTGAGATGGGAACATTCAGCCCGCTCGTCGACA

AAGACTTTCAGCAAAGAATCGCCAAGCTGATCAAAACATACAACAAAACAGGCGAGCTGCCAAAAAACGAGTAA

Domains

Predicted by InterproScan.

ABC transporter substrate-binding protein PnrA-like (Bmp)

(27-317)

Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.

3D structure

Source	ID	Structure
AlphaFold DB	A0A0K6M9I2

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.

Visualization of predicted probability:

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	H_a-value
med	Bacillus subtilis subsp. subtilis str. 168	99.685	100	0.997

Detailed information NTG0767598