Detailed information    

insolico Bioinformatically predicted

Overview

Name   comZ   Type   Regulator
Locus tag   O6U12_RS11185 Genome accession   NZ_CP114899
Coordinates   2058569..2058760 (-) Length   63 a.a.
NCBI ID   WP_003224559.1    Uniprot ID   G4NWD2
Organism   Bacillus subtilis strain     
Function   repression of comG operon (predicted from homology)   
Competence regulation

Genomic Context

Location: 2053569..2063760
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  O6U12_RS11160 (O6U12_11160) appD 2053899..2054885 (-) 987 WP_003232965.1 oligopeptide ABC transporter ATP-binding protein AppD -
  O6U12_RS11165 (O6U12_11165) yjaZ 2055075..2055860 (-) 786 WP_041056492.1 DUF2268 domain-containing protein -
  O6U12_RS11170 (O6U12_11170) fabF 2055936..2057177 (-) 1242 WP_003244890.1 beta-ketoacyl-ACP synthase II -
  O6U12_RS11175 (O6U12_11175) fabH 2057200..2058138 (-) 939 WP_003232971.1 beta-ketoacyl-ACP synthase III -
  O6U12_RS11180 (O6U12_11180) yjzB 2058303..2058539 (+) 237 WP_080333447.1 spore coat protein YjzB -
  O6U12_RS11185 (O6U12_11185) comZ 2058569..2058760 (-) 192 WP_003224559.1 ComG operon transcriptional repressor ComZ Regulator
  O6U12_RS11190 (O6U12_11190) med 2058775..2059728 (-) 954 WP_014476425.1 transcriptional regulator Med Regulator
  O6U12_RS11195 (O6U12_11195) - 2059819..2060376 (-) 558 WP_017695676.1 hypothetical protein -
  O6U12_RS11200 (O6U12_11200) - 2060458..2061192 (-) 735 WP_041340422.1 hypothetical protein -
  O6U12_RS11205 (O6U12_11205) yjzD 2061441..2061626 (+) 186 WP_003245236.1 YjzD family protein -
  O6U12_RS11210 (O6U12_11210) yjzC 2061673..2061852 (-) 180 WP_003245356.1 YjzC family protein -
  O6U12_RS11215 (O6U12_11215) argF 2061938..2062897 (-) 960 WP_269767450.1 ornithine carbamoyltransferase -

Sequence

Protein


Download         Length: 63 a.a.        Molecular weight: 7214.27 Da        Isoelectric Point: 4.2564

>NTDB_id=767597 O6U12_RS11185 WP_003224559.1 2058569..2058760(-) (comZ) [Bacillus subtilis strain]
MQHEKSLEFLQIAMKYLPEAKEQLEKSGIELSMEAIQPFMNLFTTVMAEAYELGKSDAKSETE

Nucleotide


Download         Length: 192 bp        

>NTDB_id=767597 O6U12_RS11185 WP_003224559.1 2058569..2058760(-) (comZ) [Bacillus subtilis strain]
ATGCAGCACGAAAAATCACTTGAATTCTTGCAAATTGCCATGAAATATCTCCCTGAAGCGAAAGAACAGCTTGAGAAATC
AGGCATTGAGCTCTCAATGGAGGCCATCCAGCCGTTTATGAATCTATTTACAACGGTAATGGCGGAAGCTTATGAGCTTG
GCAAGTCTGACGCTAAATCTGAAACAGAATAA

Domains

Predicted by InterproScan.

ComZ (ComZ)

(4-58)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB G4NWD2

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comZ Bacillus subtilis subsp. subtilis str. 168

100

100

1