Detailed information    

insolico Bioinformatically predicted

Overview

Name   vicX   Type   Regulator
Locus tag   QPK28_RS22180 Genome accession   NZ_CP126576
Coordinates   4256458..4257252 (-) Length   264 a.a.
NCBI ID   WP_003177960.1    Uniprot ID   A0ABY3FW26
Organism   Bacillus licheniformis strain CQMB003     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 4251458..4262252
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QPK28_RS22150 - 4251477..4251635 (-) 159 WP_003177948.1 CxxH/CxxC protein -
  QPK28_RS22155 - 4251834..4252316 (-) 483 WP_035333986.1 DUF4234 domain-containing protein -
  QPK28_RS22160 - 4252747..4253265 (-) 519 WP_011201784.1 GNAT family N-acetyltransferase -
  QPK28_RS22165 - 4253296..4253766 (-) 471 WP_003177954.1 membrane protein -
  QPK28_RS22170 - 4254022..4254867 (-) 846 WP_061578315.1 S-adenosyl-l-methionine hydroxide adenosyltransferase family protein -
  QPK28_RS22175 htrA 4255164..4256375 (-) 1212 WP_003177958.1 trypsin-like peptidase domain-containing protein Regulator
  QPK28_RS22180 vicX 4256458..4257252 (-) 795 WP_003177960.1 MBL fold metallo-hydrolase Regulator
  QPK28_RS22185 yycI 4257267..4258115 (-) 849 WP_003177962.1 two-component system regulatory protein YycI -
  QPK28_RS22190 yycH 4258102..4259466 (-) 1365 WP_003177963.1 two-component system activity regulator YycH -
  QPK28_RS22195 walK 4259456..4261300 (-) 1845 WP_003177965.1 cell wall metabolism sensor histidine kinase WalK -
  QPK28_RS22200 walR 4261308..4262015 (-) 708 WP_003177967.1 cell wall metabolism DNA-binding response regulator WalR -

Sequence

Protein


Download         Length: 264 a.a.        Molecular weight: 29219.18 Da        Isoelectric Point: 5.7678

>NTDB_id=767549 QPK28_RS22180 WP_003177960.1 4256458..4257252(-) (vicX) [Bacillus licheniformis strain CQMB003]
MSLQFSVLASGSTGNALYLETDDHAFLVDAGLSGKAMEGLMAQIDRKLDQLDGIFVTHEHSDHIKGLGVLARKYELPVYA
NEKTWKAMEGHIGKMDNGQKFVFPMETVKSFGSLDVESFGVSHDAAEPMFYVFHYNGRKLALITDTGYVSDRMKGIIRSA
NAFVFESNHDVGMLQMGRYPWNIKRRILSDVGHVSNEDAALAMTDVIGDETSRIYLAHLSQDNNMKELARMSVQQTLAAK
GFAAGETFDLYDTDPKKPTPLVAV

Nucleotide


Download         Length: 795 bp        

>NTDB_id=767549 QPK28_RS22180 WP_003177960.1 4256458..4257252(-) (vicX) [Bacillus licheniformis strain CQMB003]
ATGAGCCTGCAATTTAGCGTACTTGCGAGCGGGAGTACCGGTAATGCTTTATATTTGGAAACCGATGACCACGCTTTTTT
AGTTGACGCAGGACTTAGCGGGAAGGCGATGGAAGGGCTGATGGCGCAAATTGATCGAAAGCTTGATCAGCTCGACGGCA
TCTTTGTTACACATGAGCACAGTGACCATATAAAAGGGCTTGGCGTGCTGGCAAGAAAATATGAGCTGCCCGTTTACGCC
AATGAAAAAACGTGGAAGGCGATGGAAGGGCATATCGGCAAAATGGATAACGGCCAAAAGTTCGTTTTTCCAATGGAAAC
CGTCAAGTCATTCGGCTCCCTTGATGTCGAATCGTTCGGGGTATCCCATGATGCCGCAGAGCCGATGTTTTACGTTTTTC
ATTACAATGGCCGAAAGCTCGCTTTGATTACGGATACGGGCTATGTCAGCGACAGAATGAAAGGCATCATCCGCTCGGCA
AACGCTTTTGTTTTTGAAAGCAATCATGATGTCGGCATGCTGCAAATGGGCCGCTATCCGTGGAACATCAAGCGCCGGAT
TCTAAGCGACGTCGGACACGTATCCAATGAGGACGCGGCACTCGCAATGACCGATGTAATCGGCGATGAGACATCGAGAA
TTTATTTGGCTCATTTAAGCCAGGACAACAACATGAAAGAGCTGGCGAGAATGTCTGTGCAGCAAACGCTGGCTGCCAAA
GGATTTGCGGCAGGAGAAACGTTTGACTTATATGATACCGATCCTAAGAAACCGACGCCTCTCGTAGCGGTGTAA

Domains

Predicted by InterProScan.

Metallo-beta-lactamase superfamily (Lactamase_B)

(12-218)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vicX Streptococcus mutans UA159

53.053

99.242

0.527