Detailed information    

insolico Bioinformatically predicted

Overview

Name   ceuB   Type   Machinery gene
Locus tag   O7776_RS18605 Genome accession   NZ_CP114887
Coordinates   3802410..3803366 (-) Length   318 a.a.
NCBI ID   WP_274308399.1    Uniprot ID   -
Organism   Solibacillus daqui strain ZS111008 isolate Daqu     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 3797410..3808366
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  O7776_RS18580 - 3798339..3798950 (-) 612 WP_274308394.1 phosphatase PAP2 family protein -
  O7776_RS18585 - 3799073..3799405 (-) 333 WP_274308395.1 antibiotic biosynthesis monooxygenase family protein -
  O7776_RS18590 - 3799467..3800519 (-) 1053 WP_274308396.1 siderophore ABC transporter substrate-binding protein -
  O7776_RS18595 - 3800703..3801470 (-) 768 WP_274308397.1 ABC transporter ATP-binding protein -
  O7776_RS18600 - 3801467..3802423 (-) 957 WP_274308398.1 iron chelate uptake ABC transporter family permease subunit -
  O7776_RS18605 ceuB 3802410..3803366 (-) 957 WP_274308399.1 ABC transporter permease Machinery gene
  O7776_RS18610 menC 3803799..3804908 (-) 1110 WP_274308400.1 o-succinylbenzoate synthase -
  O7776_RS18615 - 3804921..3805754 (-) 834 WP_274308401.1 GNAT family N-acetyltransferase -
  O7776_RS18620 - 3805924..3806073 (-) 150 WP_274308402.1 hypothetical protein -
  O7776_RS18625 - 3806296..3807780 (-) 1485 WP_274308403.1 peptide MFS transporter -

Sequence

Protein


Download         Length: 318 a.a.        Molecular weight: 34741.94 Da        Isoelectric Point: 9.5538

>NTDB_id=767413 O7776_RS18605 WP_274308399.1 3802410..3803366(-) (ceuB) [Solibacillus daqui strain ZS111008 isolate Daqu]
MRLWMLVVATIILSFVSLFIGAIDINPSDLLNLDSDKTQIFLMSRVPRLMAIILAGAGMGISGLIMQSLSRNKFVSPTTS
GTLDAAKLGIVVSMVFFTSVGYMEKIIFSFTFALIGMMIFMRLLESIKIKDVIFVPLIGIMYGNIIGAISTFIAYEAEVM
QSVDTFFLGSFTLVVSGRYELLYVAVPAIILAYLYANKFTVAGMGEDFAKNLGLSYRTVLNLGLVLVALISTTVVLTVGI
IPFLGLIVPNLVSLYLGDNLRKTIPHTIFLGAAFLLFCDIISRIIVYPFEIPVNTTVAVIGSAIFLVMLFRGKAYAKK

Nucleotide


Download         Length: 957 bp        

>NTDB_id=767413 O7776_RS18605 WP_274308399.1 3802410..3803366(-) (ceuB) [Solibacillus daqui strain ZS111008 isolate Daqu]
ATGAGACTTTGGATGCTTGTAGTCGCAACTATCATCTTGTCCTTCGTATCACTATTTATCGGAGCAATCGACATTAATCC
ATCTGATTTATTGAACCTTGATTCAGATAAAACGCAGATTTTCTTAATGAGTCGAGTGCCGCGATTAATGGCGATCATAC
TTGCTGGGGCAGGGATGGGAATTTCAGGTTTAATTATGCAAAGCTTAAGTCGTAACAAGTTTGTATCACCGACTACTTCG
GGTACACTTGACGCTGCAAAGCTTGGTATTGTTGTATCGATGGTATTCTTTACAAGTGTAGGTTATATGGAGAAAATAAT
CTTCAGTTTTACATTTGCACTAATCGGTATGATGATTTTCATGCGTCTTCTTGAAAGTATAAAAATCAAGGACGTTATTT
TCGTTCCACTAATCGGGATTATGTATGGGAATATTATCGGCGCAATTTCTACATTTATTGCGTACGAAGCAGAAGTAATG
CAAAGTGTTGACACATTCTTCTTAGGGAGTTTTACGCTTGTTGTGTCAGGGCGATATGAGCTACTTTATGTAGCAGTTCC
AGCAATAATTCTAGCGTATTTATATGCCAACAAATTTACGGTTGCCGGAATGGGCGAAGATTTCGCAAAAAACTTAGGTT
TAAGTTATCGTACTGTGCTAAATCTTGGTTTAGTACTCGTAGCACTTATTTCCACAACAGTAGTATTAACAGTCGGGATT
ATTCCATTCTTAGGATTAATCGTACCGAACTTAGTTTCGTTATATTTAGGAGACAATTTACGTAAAACGATTCCACATAC
GATTTTCTTAGGGGCTGCATTCCTATTATTCTGTGATATTATTAGCCGTATTATTGTGTATCCGTTCGAAATTCCAGTTA
ATACGACAGTTGCTGTCATCGGCAGTGCAATCTTCTTAGTCATGTTATTTAGGGGGAAAGCATATGCGAAAAAATAG

Domains

Predicted by InterproScan.

FecCD transport family (FecCD)

(10-311)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

51.899

99.371

0.516