Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrQ   Type   Regulator
Locus tag   O7776_RS07715 Genome accession   NZ_CP114887
Coordinates   1611486..1613291 (+) Length   601 a.a.
NCBI ID   WP_274310015.1    Uniprot ID   -
Organism   Solibacillus daqui strain ZS111008 isolate Daqu     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 1606486..1618291
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  O7776_RS07695 - 1606614..1608494 (+) 1881 WP_274310010.1 N-acetylmuramoyl-L-alanine amidase -
  O7776_RS07700 - 1608619..1609071 (+) 453 WP_274310011.1 hypothetical protein -
  O7776_RS07705 - 1609200..1609550 (+) 351 WP_274310012.1 hypothetical protein -
  O7776_RS07710 rcrP 1609745..1611496 (+) 1752 WP_274310014.1 ABC transporter ATP-binding protein Regulator
  O7776_RS07715 rcrQ 1611486..1613291 (+) 1806 WP_274310015.1 ABC transporter ATP-binding protein Regulator
  O7776_RS07720 - 1613344..1613793 (-) 450 WP_274310016.1 DUF2975 domain-containing protein -
  O7776_RS07725 - 1614623..1614796 (-) 174 WP_274310017.1 hypothetical protein -
  O7776_RS07730 - 1615271..1615552 (+) 282 WP_274310018.1 hypothetical protein -
  O7776_RS07735 - 1615691..1616071 (+) 381 WP_274310019.1 hypothetical protein -
  O7776_RS07740 - 1616450..1616761 (+) 312 WP_274310020.1 PadR family transcriptional regulator -
  O7776_RS07745 - 1616761..1617297 (+) 537 WP_274310021.1 DUF2812 domain-containing protein -
  O7776_RS07750 - 1617310..1618212 (+) 903 WP_274310022.1 ABC transporter ATP-binding protein -

Sequence

Protein


Download         Length: 601 a.a.        Molecular weight: 66213.36 Da        Isoelectric Point: 5.3146

>NTDB_id=767392 O7776_RS07715 WP_274310015.1 1611486..1613291(+) (rcrQ) [Solibacillus daqui strain ZS111008 isolate Daqu]
MANKHGGGHPGAPGMKGEKPNHFKATIKKLIRYCKSYMPFITFSLVLAFISTAFTVYSPDLLSDMTDEIQQGLMGSMDLD
VIQKIGYILAVLYGLSFIFSYVQGFMMATITQRITKKMRGDLSTKINRLPLNYFDKTTVGNTLSRITNDVDTIGQTLNNS
LGQLVSAVATFIGVLIMMFYTNWIMAITAILSTLLGFGLMSVIMAKSQKYFDNQQAQLAEINGHIEEIYTGHQIVKVYNG
EAEAISTFHATNDKLYDNAWRAQFMSGVMMPLMQFIGNFGYVAVCIVGALLVINDVITIGVIVAFMVYIRLFTQPLAQIA
QAATNLQSTAAAAERVFAFLEEPELEREDAKQIVLGEVKGAVSFQHVSFGYTENQQVINDFTLDVQAGQKVAIVGPTGAG
KTTIVNLLMRFYEMNSGDIKIDGISIKDLTREQVHEQFCMVLQDTWLFEGSIRDNIVYSTQNVSDEQVIAAAKAVGMHQT
ISALPDGYNTLLNDKVSLSIGQKQLLTIARAMIENAPLLILDEATSSVDTRTEVQIQAAMDQLSVGKTSFVIAHRLSTIR
NADVIIVMKDGSILETGNHEELLSRGGFYADLYNSQFESAS

Nucleotide


Download         Length: 1806 bp        

>NTDB_id=767392 O7776_RS07715 WP_274310015.1 1611486..1613291(+) (rcrQ) [Solibacillus daqui strain ZS111008 isolate Daqu]
ATGGCAAATAAACATGGCGGTGGTCATCCTGGTGCTCCGGGTATGAAGGGCGAAAAGCCGAATCATTTTAAAGCAACGAT
TAAAAAGCTGATTCGCTACTGTAAATCGTATATGCCGTTTATTACTTTTTCGCTTGTATTGGCGTTTATTAGTACAGCGT
TTACCGTGTATAGCCCTGATTTACTAAGTGATATGACAGACGAAATCCAGCAAGGCTTAATGGGGTCGATGGATTTAGAT
GTCATTCAAAAAATCGGTTATATTTTAGCAGTGTTATACGGCTTAAGCTTTATTTTTAGCTATGTACAGGGCTTTATGAT
GGCAACAATTACGCAGCGTATTACGAAAAAAATGCGCGGTGATTTGTCGACGAAAATCAATCGTCTGCCACTTAATTATT
TTGATAAAACAACAGTTGGTAATACACTGAGCCGTATCACAAACGATGTCGATACGATAGGGCAAACGTTAAATAACAGC
TTAGGGCAGCTCGTGTCAGCTGTGGCAACATTTATTGGTGTGCTCATTATGATGTTTTACACGAACTGGATCATGGCGAT
TACGGCAATTCTTTCAACGCTACTTGGCTTTGGCTTGATGTCGGTTATTATGGCAAAATCACAAAAGTACTTTGATAACC
AGCAGGCACAGCTAGCGGAAATTAATGGTCATATTGAGGAAATATATACCGGGCATCAAATTGTTAAAGTATATAACGGA
GAAGCCGAGGCGATTTCAACGTTCCACGCAACAAATGACAAGCTTTATGACAATGCTTGGCGTGCACAGTTTATGTCGGG
CGTGATGATGCCATTGATGCAATTTATCGGCAACTTTGGCTATGTGGCAGTTTGTATTGTCGGTGCGTTACTTGTTATTA
ATGATGTCATTACAATTGGGGTAATCGTGGCGTTTATGGTCTATATTCGCTTATTCACACAGCCGTTAGCCCAAATTGCT
CAGGCTGCAACGAATTTGCAATCAACAGCGGCAGCGGCTGAGCGTGTATTCGCGTTTTTAGAAGAGCCAGAGCTTGAGCG
TGAAGATGCGAAGCAAATCGTGTTGGGTGAGGTAAAAGGTGCGGTTTCCTTTCAGCATGTGTCGTTTGGCTATACTGAAA
ATCAGCAAGTTATTAACGATTTCACACTGGATGTACAGGCGGGACAAAAGGTGGCAATTGTTGGGCCAACAGGTGCTGGT
AAAACGACGATTGTAAATTTACTGATGCGCTTTTATGAAATGAATTCAGGTGATATTAAAATCGATGGCATTTCGATTAA
AGACTTAACACGTGAGCAGGTTCATGAGCAGTTTTGTATGGTGTTGCAGGACACATGGCTTTTTGAAGGCTCAATTCGAG
ATAATATTGTTTACTCAACGCAAAATGTGTCCGATGAGCAAGTAATTGCGGCAGCAAAAGCAGTAGGGATGCATCAAACG
ATTTCGGCATTACCTGATGGCTACAATACGTTGTTAAATGATAAGGTCAGTCTATCAATTGGGCAAAAGCAGCTGTTAAC
GATTGCCCGTGCGATGATTGAAAATGCACCGCTTTTAATTTTAGATGAGGCAACAAGCTCGGTGGATACACGTACCGAGG
TACAAATTCAAGCGGCGATGGATCAGCTGTCAGTTGGTAAAACGTCGTTTGTTATTGCTCACCGTCTATCAACGATTCGC
AATGCGGATGTCATTATTGTCATGAAGGATGGCTCGATTTTAGAAACAGGAAACCATGAAGAACTGCTATCGCGCGGTGG
ATTTTATGCGGACCTATATAATAGTCAATTTGAAAGTGCGTCATAA

Domains

Predicted by InterproScan.

ABC transporter transmembrane region (ABC_membrane)

(42-316)

ABC transporter (ABC_tran)

(379-526)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrQ Streptococcus mutans UA159

55.286

96.007

0.531