Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrP   Type   Regulator
Locus tag   O7776_RS07710 Genome accession   NZ_CP114887
Coordinates   1609745..1611496 (+) Length   583 a.a.
NCBI ID   WP_274310014.1    Uniprot ID   -
Organism   Solibacillus daqui strain ZS111008 isolate Daqu     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 1604745..1616496
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  O7776_RS07685 - 1604796..1605332 (+) 537 WP_274310007.1 N-acetylmuramoyl-L-alanine amidase -
  O7776_RS07690 - 1605412..1606317 (+) 906 WP_274310009.1 stalk domain-containing protein -
  O7776_RS07695 - 1606614..1608494 (+) 1881 WP_274310010.1 N-acetylmuramoyl-L-alanine amidase -
  O7776_RS07700 - 1608619..1609071 (+) 453 WP_274310011.1 hypothetical protein -
  O7776_RS07705 - 1609200..1609550 (+) 351 WP_274310012.1 hypothetical protein -
  O7776_RS07710 rcrP 1609745..1611496 (+) 1752 WP_274310014.1 ABC transporter ATP-binding protein Regulator
  O7776_RS07715 rcrQ 1611486..1613291 (+) 1806 WP_274310015.1 ABC transporter ATP-binding protein Regulator
  O7776_RS07720 - 1613344..1613793 (-) 450 WP_274310016.1 DUF2975 domain-containing protein -
  O7776_RS07725 - 1614623..1614796 (-) 174 WP_274310017.1 hypothetical protein -
  O7776_RS07730 - 1615271..1615552 (+) 282 WP_274310018.1 hypothetical protein -
  O7776_RS07735 - 1615691..1616071 (+) 381 WP_274310019.1 hypothetical protein -

Sequence

Protein


Download         Length: 583 a.a.        Molecular weight: 64006.85 Da        Isoelectric Point: 7.8771

>NTDB_id=767391 O7776_RS07710 WP_274310014.1 1609745..1611496(+) (rcrP) [Solibacillus daqui strain ZS111008 isolate Daqu]
MLKIFSYLQRKEWILVSISIVFIVVQVFLDLKLPDYMAEITMLIQTDGTSVNDLIAPGSYMLLCAIGSMIAAVIVGYFAA
QVAAGLARRLRGQVFEKTLSFSMAEMNHFSTASLITRSTNDITQVQMLVAMGLQVVIKAPILAIWAITKIANKNLEWTAA
TGVAVLVLILLISIIVIFAIPKFRIIQTLTDNLNRVTRENLTGIRVVRAYNAEGYQLEKFDGANKELMDTNLYAMRLMAL
IFPTMGLIMSGLSLSIYWIGAFLIHEANAAEKLPLFSDMVVFMSYAMQVVMAFMMVSMIFIMMPRAVVSAKRILEVLNTK
ITIQDGNGAVGSGVGTVEFRGVSFKYPGAEEAIVEDVSFSAKKGETVAFIGATGSGKTTILNLIPRLYDVSSGAVFVDGI
NVKDYKQEALHKKIGYVSQSAVLFSGSVASNVSYGAEATMLERVKEAVTIAQGQDFVEKLDGSYEATISQGGKNISGGQK
QRLSIARAIYHQPDIYLFDDSFSALDYKTDRALRQALKTETKDAITFIVAQRIGTIKEANQIIVLEHGRIVGKGTHEELM
KTCETYKEIAYSQLSKEELGDGK

Nucleotide


Download         Length: 1752 bp        

>NTDB_id=767391 O7776_RS07710 WP_274310014.1 1609745..1611496(+) (rcrP) [Solibacillus daqui strain ZS111008 isolate Daqu]
ATGTTAAAAATTTTTTCATATTTACAGAGAAAAGAATGGATACTTGTATCAATTAGTATTGTGTTCATCGTTGTGCAGGT
GTTCCTGGACTTGAAGCTGCCAGATTACATGGCAGAAATTACGATGCTTATTCAAACGGACGGCACAAGTGTAAACGATT
TGATTGCACCGGGTAGTTATATGTTGCTGTGTGCGATCGGTAGTATGATTGCAGCGGTTATTGTTGGTTATTTCGCCGCG
CAAGTTGCTGCTGGATTAGCACGGAGATTGCGAGGTCAAGTGTTTGAAAAAACGCTTTCCTTTTCAATGGCGGAGATGAA
TCATTTTTCTACGGCGAGTTTAATTACACGCTCTACGAATGATATTACACAAGTGCAAATGCTTGTAGCGATGGGGTTAC
AGGTCGTTATTAAAGCACCAATTTTAGCGATTTGGGCAATTACAAAAATCGCAAATAAAAATTTAGAATGGACGGCTGCA
ACGGGTGTAGCCGTATTAGTTTTGATTTTACTTATTTCGATAATAGTAATATTTGCGATTCCGAAGTTCCGTATTATTCA
AACATTGACTGATAATTTAAATCGCGTAACACGTGAAAACTTAACAGGAATTCGCGTTGTGCGTGCGTATAATGCAGAGG
GCTACCAGCTAGAGAAGTTTGACGGGGCTAACAAAGAATTGATGGATACGAATTTATATGCAATGCGTTTAATGGCACTC
ATTTTCCCGACGATGGGGCTTATTATGTCAGGGCTTAGCTTATCGATTTACTGGATTGGTGCGTTTCTAATTCATGAGGC
TAATGCTGCTGAGAAATTGCCACTGTTTTCGGATATGGTCGTCTTTATGTCATATGCGATGCAGGTCGTGATGGCATTTA
TGATGGTTAGTATGATTTTCATTATGATGCCACGTGCAGTTGTATCGGCAAAGCGTATTCTAGAAGTATTAAACACGAAA
ATTACAATTCAAGATGGTAATGGCGCAGTAGGTAGCGGGGTAGGGACAGTCGAGTTTCGCGGTGTAAGCTTTAAATATCC
TGGTGCTGAGGAAGCGATTGTTGAGGATGTTAGTTTTAGTGCAAAAAAAGGTGAAACAGTGGCCTTTATTGGAGCTACGG
GAAGCGGTAAAACAACGATTTTAAATTTAATTCCGCGCCTGTATGATGTGTCTTCTGGAGCAGTTTTCGTTGATGGTATT
AACGTGAAGGACTATAAGCAAGAAGCATTACACAAAAAAATTGGCTATGTGTCACAATCAGCTGTGTTATTTAGTGGCTC
AGTAGCGTCAAATGTATCGTATGGTGCTGAGGCGACAATGCTAGAGCGTGTGAAGGAAGCAGTGACGATTGCACAAGGAC
AGGATTTTGTTGAAAAGTTAGATGGGTCTTATGAGGCAACGATTTCACAAGGTGGAAAAAATATATCTGGTGGACAAAAG
CAACGTTTATCGATTGCACGTGCGATTTATCATCAGCCTGACATTTATTTATTTGACGATTCCTTCTCGGCGCTCGATTA
TAAAACCGACCGCGCATTGCGACAGGCACTGAAAACTGAAACAAAGGACGCTATTACGTTTATCGTGGCGCAGCGTATCG
GGACGATTAAAGAAGCAAATCAAATCATTGTACTTGAGCATGGTCGCATTGTTGGTAAGGGGACGCATGAAGAGCTCATG
AAAACTTGCGAAACCTATAAGGAAATTGCGTATTCACAGCTTTCGAAGGAGGAGTTAGGCGATGGCAAATAA

Domains

Predicted by InterproScan.

ABC transporter transmembrane region (ABC_membrane)

(17-293)

ABC transporter (ABC_tran)

(355-501)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrP Streptococcus mutans UA159

51.333

100

0.528