Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   O5O48_RS06335 Genome accession   NZ_CP114836
Coordinates   1379245..1379658 (+) Length   137 a.a.
NCBI ID   WP_088276063.1    Uniprot ID   A0AAQ1G8I6
Organism   Halopseudomonas sp. MFKK-1     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 1374245..1384658
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  O5O48_RS06305 - 1374471..1375466 (-) 996 WP_088276058.1 aspartate carbamoyltransferase catalytic subunit -
  O5O48_RS06310 pyrR 1375474..1375986 (-) 513 WP_228247092.1 bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR -
  O5O48_RS06315 ruvX 1375983..1376423 (-) 441 WP_088276060.1 Holliday junction resolvase RuvX -
  O5O48_RS06320 - 1376423..1376983 (-) 561 WP_228247145.1 YqgE/AlgH family protein -
  O5O48_RS06325 - 1377054..1377950 (-) 897 WP_269688675.1 energy transducer TonB -
  O5O48_RS06330 gshB 1378065..1379018 (-) 954 WP_228247091.1 glutathione synthase -
  O5O48_RS06335 pilG 1379245..1379658 (+) 414 WP_088276063.1 response regulator Regulator
  O5O48_RS06340 pilH 1379696..1380061 (+) 366 WP_088276064.1 twitching motility response regulator PilH -
  O5O48_RS06345 - 1380107..1380643 (+) 537 WP_088276065.1 chemotaxis protein CheW -
  O5O48_RS06350 - 1380732..1382771 (+) 2040 WP_228247090.1 methyl-accepting chemotaxis protein -
  O5O48_RS06355 - 1382827..1383711 (+) 885 WP_269688462.1 CheR family methyltransferase -

Sequence

Protein


Download         Length: 137 a.a.        Molecular weight: 14821.16 Da        Isoelectric Point: 7.2440

>NTDB_id=767227 O5O48_RS06335 WP_088276063.1 1379245..1379658(+) (pilG) [Halopseudomonas sp. MFKK-1]
MEENFESLKVMVIDDSKTIRRTAETLLKKVGCNVITAVDGFDALAKIADNHPDIIFVDIMMPRLDGYQTCALIKNNSAFR
ATPVIMLSSKDGLFDKAKGRIVGSDQYLTKPFSKEELLGAIRAHVPQGGHVAGAAGA

Nucleotide


Download         Length: 414 bp        

>NTDB_id=767227 O5O48_RS06335 WP_088276063.1 1379245..1379658(+) (pilG) [Halopseudomonas sp. MFKK-1]
ATGGAAGAAAATTTCGAAAGCCTCAAAGTCATGGTGATTGATGACAGCAAGACGATCAGACGCACGGCCGAGACCCTGCT
GAAGAAGGTCGGCTGTAATGTAATCACGGCGGTTGACGGCTTTGACGCGCTGGCCAAGATTGCCGACAACCACCCGGACA
TCATCTTTGTCGACATCATGATGCCGCGCCTTGACGGCTATCAGACCTGTGCCCTGATCAAGAACAACAGTGCCTTCCGG
GCGACACCGGTGATCATGCTGTCCAGCAAGGACGGTCTGTTTGACAAGGCCAAGGGCCGGATCGTCGGTTCCGATCAATA
CCTGACCAAACCGTTCAGCAAGGAAGAGCTGCTGGGAGCCATCCGCGCTCATGTCCCGCAGGGCGGTCATGTTGCGGGCG
CCGCTGGCGCCTGA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(10-121)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

78.4

91.241

0.715
  vicR Streptococcus mutans UA159

40.625

93.431

0.38