Detailed information    

insolico Bioinformatically predicted

Overview

Name   vicX   Type   Regulator
Locus tag   QNK06_RS22035 Genome accession   NZ_CP126097
Coordinates   4172384..4173178 (-) Length   264 a.a.
NCBI ID   WP_003226939.1    Uniprot ID   A0ABU0V6L5
Organism   Bacillus subtilis strain KF24     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 4167384..4178178
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QNK06_RS22010 (QNK06_22010) rocD 4167960..4169165 (-) 1206 WP_172861696.1 ornithine aminotransferase -
  QNK06_RS22015 (QNK06_22015) rocR 4169406..4170791 (+) 1386 WP_003244510.1 arginine utilization regulatory protein RocR -
  QNK06_RS22020 (QNK06_22020) - 4170773..4170931 (-) 159 Protein_4289 ATP-binding protein -
  QNK06_RS22025 (QNK06_22025) - 4170953..4171080 (-) 128 Protein_4290 hypothetical protein -
  QNK06_RS22030 (QNK06_22030) htrA 4171100..4172302 (-) 1203 WP_283933971.1 serine protease HtrC Regulator
  QNK06_RS22035 (QNK06_22035) vicX 4172384..4173178 (-) 795 WP_003226939.1 MBL fold metallo-hydrolase Regulator
  QNK06_RS22040 (QNK06_22040) walI 4173200..4174042 (-) 843 WP_003244037.1 WalRK two-component regulatory system regulator WalI -
  QNK06_RS22045 (QNK06_22045) walH 4174029..4175396 (-) 1368 WP_159377178.1 WalRK two-component regulatory system regulator WalH -
  QNK06_RS22050 (QNK06_22050) walK 4175386..4177221 (-) 1836 WP_106610980.1 cell wall metabolism sensor histidine kinase WalK -
  QNK06_RS22055 (QNK06_22055) walR 4177229..4177936 (-) 708 WP_003244363.1 cell wall metabolism DNA-binding response regulator WalR -

Sequence

Protein


Download         Length: 264 a.a.        Molecular weight: 29283.28 Da        Isoelectric Point: 5.8036

>NTDB_id=767040 QNK06_RS22035 WP_003226939.1 4172384..4173178(-) (vicX) [Bacillus subtilis strain KF24]
MSLQFSVLASGSTGNAFYLETEDHAFLVDAGLSGKAMDGLMAQIGRKLDDVDGIFVTHEHSDHIKGLGVVARKYKLPIYA
NEKTWKAMENQIGKIDTDQKFVFPMETVKSFGGLDVESFGVSHDAAEPMFYVFHYNGRKLALMTDTGYVSDRMKGIIRSA
NVFVFESNHDVGMLQMGRYPWSIKRRILSDVGHVSNEDAALAMTDVIGDETSRIYLAHLSQDNNMKELARMSVQQTLASK
GFVTGETFDLYDTDPKKATPLCAV

Nucleotide


Download         Length: 795 bp        

>NTDB_id=767040 QNK06_RS22035 WP_003226939.1 4172384..4173178(-) (vicX) [Bacillus subtilis strain KF24]
ATGAGCTTGCAATTTAGCGTACTTGCGAGCGGGAGTACGGGAAATGCGTTTTACCTCGAAACAGAGGATCACGCATTTTT
AGTGGACGCCGGTTTGAGCGGAAAAGCCATGGATGGGCTAATGGCACAGATCGGGCGTAAGCTGGATGATGTAGACGGCA
TTTTTGTGACGCATGAGCATAGTGACCATATTAAGGGCCTTGGTGTCGTCGCCAGAAAGTACAAGCTTCCGATCTATGCG
AATGAGAAGACTTGGAAAGCGATGGAGAATCAAATCGGGAAAATTGACACCGATCAAAAGTTTGTATTTCCAATGGAGAC
GGTGAAGTCGTTCGGCGGACTTGATGTTGAATCGTTTGGCGTTTCCCACGATGCGGCGGAACCGATGTTTTATGTATTCC
ATTATAACGGCCGAAAGCTCGCGTTAATGACAGATACGGGATATGTCAGCGACAGGATGAAAGGCATTATCCGTTCAGCG
AATGTATTTGTGTTTGAAAGCAATCACGATGTCGGTATGCTGCAAATGGGAAGATACCCATGGAGCATTAAGCGGCGGAT
TTTAAGTGACGTCGGGCACGTGTCAAATGAAGATGCTGCCTTGGCGATGACGGATGTCATTGGCGATGAGACGTCTCGTA
TTTACCTGGCGCATTTGAGCCAGGACAACAACATGAAGGAGCTGGCAAGAATGTCTGTGCAGCAGACATTGGCTTCTAAA
GGATTTGTGACGGGTGAGACATTTGACTTATACGACACCGATCCGAAGAAGGCCACTCCGCTTTGCGCTGTATAA

Domains

Predicted by InterProScan.

Metallo-beta-lactamase superfamily (Lactamase_B)

(12-218)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vicX Streptococcus mutans UA159

53.435

99.242

0.53