Detailed information    

insolico Bioinformatically predicted

Overview

Name   letA   Type   Regulator
Locus tag   QNK06_RS20320 Genome accession   NZ_CP126097
Coordinates   3826298..3826672 (-) Length   124 a.a.
NCBI ID   WP_003227621.1    Uniprot ID   A0A9W5LLN9
Organism   Bacillus subtilis strain KF24     
Function   regulate competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 3821298..3831672
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QNK06_RS20295 (QNK06_20295) - 3821462..3821623 (-) 162 WP_003227632.1 hypothetical protein -
  QNK06_RS20300 (QNK06_20300) glpX 3821838..3822803 (-) 966 WP_014481197.1 class II fructose-bisphosphatase -
  QNK06_RS20305 (QNK06_20305) murAB 3822834..3824123 (-) 1290 WP_003227628.1 UDP-N-acetylglucosamine 1-carboxyvinyltransferase -
  QNK06_RS20310 (QNK06_20310) fsa 3824502..3825140 (-) 639 WP_003227626.1 fructose-6-phosphate aldolase -
  QNK06_RS20315 (QNK06_20315) fbaA 3825260..3826117 (-) 858 WP_003243339.1 class II fructose-bisphosphate aldolase -
  QNK06_RS20320 (QNK06_20320) letA 3826298..3826672 (-) 375 WP_003227621.1 sporulation initiation phosphotransferase Spo0F Regulator
  QNK06_RS20325 (QNK06_20325) ywjG 3826838..3827359 (+) 522 WP_014481199.1 DUF2529 domain-containing protein -
  QNK06_RS20330 (QNK06_20330) pyrG 3827441..3829048 (-) 1608 WP_110109502.1 glutamine hydrolyzing CTP synthase -
  QNK06_RS20335 (QNK06_20335) rpoE 3829290..3829811 (-) 522 WP_003243661.1 DNA-directed RNA polymerase subunit delta -
  QNK06_RS20340 (QNK06_20340) acdA 3829994..3831133 (-) 1140 WP_125121089.1 acyl-CoA dehydrogenase AcdA -

Sequence

Protein


Download         Length: 124 a.a.        Molecular weight: 14227.68 Da        Isoelectric Point: 4.6400

>NTDB_id=767034 QNK06_RS20320 WP_003227621.1 3826298..3826672(-) (letA) [Bacillus subtilis strain KF24]
MMNEKILIVDDQYGIRILLNEVFNKEGYQTFQAANGLQALDIVTKERPDLVLLDMKIPGMDGIEILKRMKVIDENIRVII
MTAYGELDMIQESKELGALTHFAKPFDIDEIRDAVKKYLPLKSN

Nucleotide


Download         Length: 375 bp        

>NTDB_id=767034 QNK06_RS20320 WP_003227621.1 3826298..3826672(-) (letA) [Bacillus subtilis strain KF24]
ATGATGAATGAAAAAATTTTAATCGTTGATGATCAATACGGCATTCGTATTTTGCTAAATGAAGTGTTCAATAAAGAAGG
CTACCAGACGTTTCAGGCTGCGAACGGCCTGCAGGCGCTTGACATTGTGACAAAAGAACGGCCCGACCTTGTGCTTTTGG
ACATGAAAATTCCCGGCATGGACGGAATCGAAATCTTAAAACGGATGAAGGTCATTGACGAAAACATCCGGGTCATTATC
ATGACGGCATACGGAGAGCTCGACATGATCCAGGAATCGAAGGAATTGGGCGCTCTGACGCACTTTGCCAAGCCGTTTGA
CATCGACGAAATCAGAGACGCCGTCAAAAAATATCTGCCCCTGAAGTCTAACTGA

Domains

Predicted by InterProScan.

Response regulator receiver domain (Response_reg)

(6-116)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A9W5LLN9

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  letA Legionella pneumophila str. Paris

38.462

94.355

0.363
  letA Legionella pneumophila strain ERS1305867

38.462

94.355

0.363