Detailed information    

insolico Bioinformatically predicted

Overview


Name   comQ   Type   Regulator
Locus tag   QNH31_RS16050 Genome accession   NZ_CP126094
Coordinates   3098432..3099292 (-) Length   286 a.a.
NCBI ID   WP_041850585.1    Uniprot ID   -
Organism   Bacillus subtilis strain G2S2     
Function   modification of ComX; production of ComX (predicted from homology)   
Competence regulation

Genomic Context


Location: 3093432..3104292
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QNH31_RS16015 (QNH31_16015) mrpE 3093662..3094138 (+) 477 WP_003228815.1 Na+/H+ antiporter subunit E -
  QNH31_RS16020 (QNH31_16020) mrpF 3094138..3094422 (+) 285 WP_003228814.1 Na(+)/H(+) antiporter subunit F1 -
  QNH31_RS16025 (QNH31_16025) mnhG 3094406..3094780 (+) 375 WP_014477830.1 monovalent cation/H(+) antiporter subunit G -
  QNH31_RS16030 (QNH31_16030) yuxO 3094819..3095199 (-) 381 WP_014477831.1 hotdog fold thioesterase -
  QNH31_RS16035 (QNH31_16035) comA 3095218..3095862 (-) 645 WP_003220716.1 two-component system response regulator ComA Regulator
  QNH31_RS16040 (QNH31_16040) comP 3095943..3098243 (-) 2301 WP_041850586.1 histidine kinase Regulator
  QNH31_RS16045 (QNH31_16045) comX 3098255..3098419 (-) 165 WP_015384519.1 competence pheromone ComX -
  QNH31_RS16050 (QNH31_16050) comQ 3098432..3099292 (-) 861 WP_041850585.1 polyprenyl synthetase family protein Regulator
  QNH31_RS16055 (QNH31_16055) degQ 3099476..3099616 (-) 141 WP_003220708.1 degradation enzyme regulation protein DegQ Regulator
  QNH31_RS16060 (QNH31_16060) - 3099838..3099900 (+) 63 Protein_3094 hypothetical protein -
  QNH31_RS16065 (QNH31_16065) - 3100079..3100447 (+) 369 WP_041850584.1 hypothetical protein -
  QNH31_RS16070 (QNH31_16070) pdeH 3100423..3101652 (-) 1230 WP_003243525.1 cyclic di-GMP phosphodiesterase -
  QNH31_RS16075 (QNH31_16075) pncB 3101789..3103261 (-) 1473 WP_003228788.1 nicotinate phosphoribosyltransferase -
  QNH31_RS16080 (QNH31_16080) pncA 3103277..3103828 (-) 552 WP_038828671.1 isochorismatase family cysteine hydrolase -

Sequence


Protein


Download         Length: 286 a.a.        Molecular weight: 32545.49 Da        Isoelectric Point: 4.8309

>NTDB_id=766861 QNH31_RS16050 WP_041850585.1 3098432..3099292(-) (comQ) [Bacillus subtilis strain G2S2]
MKEIVSQKIMNQDLERYLQNFIESKDTFEFADLALHHYLAFNGQDQKAIELLAAGIELLILSFDIYDDLEDQDNGSAVWM
KIDSSIALNAVTALYTLSIQVMCQASHEPEFSQEILNFALQSIQGQHDDIVNAPQTEEACLEMIKNKSGALTALPCVMGV
MLATGKYHPIVASYSYELGIIAQIENDYRGLYYLNNDFIQKKNTLAYLYLNKRFNAASAEILSWYENTELFLSLNSKQIK
EKLTEAGVVQYLLVMKHLSLQKLKKEIARLELQENKIKKLITGIIK

Nucleotide


Download         Length: 861 bp        

>NTDB_id=766861 QNH31_RS16050 WP_041850585.1 3098432..3099292(-) (comQ) [Bacillus subtilis strain G2S2]
ATGAAGGAGATTGTAAGCCAAAAAATAATGAATCAGGACTTGGAACGATATCTTCAGAATTTTATTGAGTCTAAGGATAC
GTTTGAGTTTGCCGATTTGGCTCTTCATCATTATTTAGCTTTTAACGGTCAGGACCAAAAAGCAATCGAATTGCTAGCTG
CCGGAATTGAATTGCTTATACTCTCATTCGATATTTATGATGACTTAGAGGATCAAGATAATGGAAGTGCTGTCTGGATG
AAGATTGACTCGTCAATCGCTTTAAATGCAGTTACAGCTCTTTACACCCTAAGTATACAAGTGATGTGTCAAGCTAGTCA
TGAACCAGAATTTTCACAAGAGATATTGAATTTTGCGTTACAATCAATTCAAGGCCAGCATGATGATATTGTGAATGCGC
CGCAAACTGAAGAAGCCTGTCTTGAAATGATCAAAAATAAATCAGGAGCGCTAACGGCATTGCCCTGTGTAATGGGAGTA
ATGCTGGCAACAGGCAAATACCATCCCATTGTAGCTTCTTATTCTTATGAACTTGGGATTATTGCACAAATCGAAAATGA
TTACCGAGGTTTATATTATCTAAATAACGATTTTATTCAGAAGAAAAACACATTGGCATACTTATACTTAAATAAACGTT
TTAATGCAGCTTCTGCAGAAATCTTGAGTTGGTATGAAAATACTGAGTTGTTCTTATCATTGAATTCCAAACAAATAAAA
GAAAAATTAACTGAGGCAGGCGTAGTGCAATATTTACTTGTAATGAAACACTTGTCATTACAAAAACTAAAGAAAGAAAT
TGCTAGATTAGAATTGCAAGAGAATAAAATAAAAAAATTAATAACAGGAATCATAAAATAA

Domains


Predicted by InterProScan.

(39-197)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comQ Bacillus subtilis subsp. subtilis str. 168

45.423

99.301

0.451