Detailed information NTG0766307

Bioinformatically predicted

Overview

• Name: clpX
• Type: Regulator
• Locus tag: QIH95_RS19850
• Genome accession: NZ_CP126013
• Coordinates: 4331411..4332682 (+)
• Length: 423 a.a.
• NCBI ID: WP_014494834.1
• Uniprot ID: A0ABY7MCD4
• Organism: Bradyrhizobium japonicum strain S11L-Bj
• Function: require for competence development (predicted from homology) Competence regulation

Genomic Context

Location: 4326411..4337682

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
QIH95_RS19825 (QIH95_19810)	-	4326425..4326859 (+)	435	WP_038959132.1	GNAT family N-acetyltransferase	-
QIH95_RS19830 (QIH95_19815)	-	4326887..4328239 (-)	1353	WP_038959133.1	multicopper oxidase family protein	-
QIH95_RS19840 (QIH95_19825)	tig	4328652..4330013 (+)	1362	WP_014494832.1	trigger factor	-
QIH95_RS19845 (QIH95_19830)	clpP	4330317..4330949 (+)	633	WP_014494833.1	ATP-dependent Clp protease proteolytic subunit	Regulator
QIH95_RS19850 (QIH95_19835)	clpX	4331411..4332682 (+)	1272	WP_014494834.1	ATP-dependent Clp protease ATP-binding subunit ClpX	Regulator
QIH95_RS19855 (QIH95_19840)	lon	4333006..4335429 (+)	2424	WP_014494835.1	endopeptidase La	-
QIH95_RS19860 (QIH95_19845)	-	4335499..4335903 (+)	405	WP_038959134.1	GFA family protein	-
QIH95_RS19865 (QIH95_19850)	-	4336426..4336686 (+)	261	WP_038959135.1	hypothetical protein	-

Sequence

Protein

• Length: 423 a.a.
• Molecular weight: 46576.40 Da
• Isoelectric Point: 5.5461

>NTDB_id=766307 QIH95_RS19850 WP_014494834.1 4331411..4332682(+) (clpX) [Bradyrhizobium japonicum strain S11L-Bj]
MSKVGTSDSKNTLYCSFCGKSQHEVRKLIAGPTVFICDECVELCMDIIREENKSSLVKSRDGIPTPKEICKVLDDYVIGQ
SHAKKVLSVAVHNHYKRLNHQTKHNDVELAKSNILLIGPTGSGKTLLAQTLARILDVPFTMADATTLTEAGYVGEDVENI
ILKLLQAADYNVERAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKIMEGTVASVPPQGGRKHPQQEFLQVDTT
NILFICGGAFAGLEKIISARGRSTSIGFAAQVLAPEDRRTGEIFRHVEPEDLLKYGLIPEFVGRLPVVATLEDLDETSLK
KILTEPKNALVKQYQRLFEMENIELTFADEALGAVARKAIERKTGARGLRSILEAILLETMFDLPGLEGVEEVVISREVV
EGTARPLYIYADRSDRAVENASA

Nucleotide

• Length: 1272 bp

>NTDB_id=766307 QIH95_RS19850 WP_014494834.1 4331411..4332682(+) (clpX) [Bradyrhizobium japonicum strain S11L-Bj]
ATGAGTAAGGTCGGCACGAGCGACTCCAAGAACACGCTGTATTGCTCGTTCTGCGGCAAGAGCCAGCACGAAGTCCGCAA
ACTGATCGCGGGTCCCACGGTCTTCATCTGCGACGAGTGCGTTGAGCTCTGCATGGACATCATCCGCGAGGAGAACAAAT
CCTCGCTCGTGAAGTCGCGCGACGGCATTCCGACGCCGAAGGAAATCTGCAAGGTCCTGGACGATTACGTCATCGGCCAG
AGCCATGCGAAGAAGGTCCTGTCGGTCGCGGTGCACAATCACTACAAGCGCCTCAACCACCAGACCAAGCACAACGACGT
CGAGCTCGCGAAGTCGAACATCCTGCTGATCGGTCCGACCGGTTCGGGCAAGACGCTGCTCGCGCAGACGCTCGCCCGCA
TCCTGGACGTGCCGTTCACGATGGCCGATGCAACGACGCTGACCGAAGCCGGCTATGTCGGCGAGGACGTCGAGAACATC
ATCCTGAAGCTGCTCCAGGCCGCCGACTACAATGTCGAGCGCGCCCAGCGCGGCATCGTCTACATCGACGAAATCGACAA
GATCAGCCGCAAGTCCGACAATCCCTCGATCACGCGCGACGTGTCGGGTGAGGGCGTGCAGCAGGCGTTGCTGAAGATCA
TGGAAGGCACGGTGGCTTCGGTCCCGCCGCAGGGCGGCCGCAAGCATCCGCAGCAGGAGTTCCTGCAGGTGGATACCACC
AACATCCTGTTCATCTGCGGCGGTGCGTTCGCCGGCCTCGAGAAGATCATCTCGGCGCGCGGGCGGTCGACCTCGATCGG
CTTCGCCGCCCAGGTGCTGGCGCCGGAGGATCGCCGTACCGGCGAGATCTTCCGTCACGTCGAGCCTGAGGACCTCCTGA
AGTACGGCCTCATCCCCGAATTCGTCGGCCGTCTGCCGGTCGTGGCGACGCTCGAGGATCTGGACGAGACCTCGCTGAAG
AAGATCCTCACCGAGCCGAAGAACGCGCTGGTGAAACAGTACCAGCGGCTGTTCGAGATGGAGAACATCGAGCTGACCTT
CGCCGACGAGGCGCTTGGCGCGGTTGCCCGCAAGGCGATCGAGCGCAAGACTGGCGCGCGTGGTCTGCGTTCGATCCTCG
AGGCGATCCTGCTCGAGACCATGTTCGACCTGCCGGGCCTGGAAGGTGTGGAAGAAGTCGTGATTTCGCGCGAAGTCGTG
GAAGGTACGGCCCGTCCGCTCTACATCTACGCCGATCGGTCCGATCGCGCCGTCGAGAACGCCAGCGCCTGA

Domains

Predicted by InterProScan.

• ClpX C4-type zinc finger (zf-C4_ClpX) (13-50)

• C-terminal, D2-small domain, of ClpB protein (ClpB_D2-small) (314-385)

• AAA domain (Cdc48 subfamily) (AAA_2) (111-307)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpX	Streptococcus mutans UA159	61.728	95.745	0.591
clpX	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	55.062	95.745	0.527