Detailed information    

insolico Bioinformatically predicted

Overview

Name   comQ   Type   Regulator
Locus tag   QNK10_RS16000 Genome accession   NZ_CP125982
Coordinates   2987779..2988642 (-) Length   287 a.a.
NCBI ID   WP_014480705.1    Uniprot ID   Q9FAF1
Organism   Bacillus subtilis strain ZKY05     
Function   modification of ComX; production of ComX (predicted from homology)   
Competence regulation

Genomic Context

Location: 2982779..2993642
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QNK10_RS15965 (QNK10_15995) mrpE 2982947..2983423 (+) 477 WP_003228815.1 Na+/H+ antiporter subunit E -
  QNK10_RS15970 (QNK10_16000) mrpF 2983423..2983707 (+) 285 WP_003228814.1 Na(+)/H(+) antiporter subunit F1 -
  QNK10_RS15975 (QNK10_16005) mnhG 2983691..2984065 (+) 375 WP_014477830.1 monovalent cation/H(+) antiporter subunit G -
  QNK10_RS15980 (QNK10_16010) yuxO 2984104..2984484 (-) 381 WP_069837723.1 hotdog fold thioesterase -
  QNK10_RS15985 (QNK10_16015) comA 2984503..2985147 (-) 645 WP_003220716.1 two-component system response regulator ComA Regulator
  QNK10_RS15990 (QNK10_16020) comP 2985228..2987540 (-) 2313 WP_069964288.1 sensor histidine kinase Regulator
  QNK10_RS15995 (QNK10_16025) comX 2987556..2987777 (-) 222 WP_014480704.1 competence pheromone ComX -
  QNK10_RS16000 (QNK10_16030) comQ 2987779..2988642 (-) 864 WP_014480705.1 polyprenyl synthetase family protein Regulator
  QNK10_RS16005 (QNK10_16035) degQ 2988827..2988967 (-) 141 WP_003220708.1 degradation enzyme regulation protein DegQ Regulator
  QNK10_RS16010 (QNK10_16040) - 2989189..2989314 (+) 126 WP_003228793.1 hypothetical protein -
  QNK10_RS16015 (QNK10_16045) - 2989429..2989797 (+) 369 WP_046381300.1 hypothetical protein -
  QNK10_RS16020 (QNK10_16050) pdeH 2989773..2991002 (-) 1230 WP_046381301.1 cyclic di-GMP phosphodiesterase -
  QNK10_RS16025 (QNK10_16055) pncB 2991139..2992611 (-) 1473 WP_003228788.1 nicotinate phosphoribosyltransferase -
  QNK10_RS16030 (QNK10_16060) pncA 2992627..2993178 (-) 552 WP_014477836.1 cysteine hydrolase family protein -

Sequence

Protein


Download         Length: 287 a.a.        Molecular weight: 32882.57 Da        Isoelectric Point: 5.2201

>NTDB_id=765890 QNK10_RS16000 WP_014480705.1 2987779..2988642(-) (comQ) [Bacillus subtilis strain ZKY05]
MKEIVDENILNEDLKVKLISFIKEKKQFSFAELAYYHYIAFDGKNDKAIELLASGIELLILSADIFDDIEDKDNLQASWM
KLDPSIATNAATALYTLSLQVIGSVSNHPKLLSLTLQYSLQSLQGQHVDLNLTASSESEYIEMIKLKSGSLVTLPSILGV
YLATGEYNETVEEYSRYLGIVEQIANDHYGLYYPNYNDFKTRHTLAFNYLKNKFNQSSIDLLNFYAQENHMINNLEDLKG
KLRESGVIQYLNVIKNLAVENFKESFKKLRLDEQRKNKLLIQLLRGI

Nucleotide


Download         Length: 864 bp        

>NTDB_id=765890 QNK10_RS16000 WP_014480705.1 2987779..2988642(-) (comQ) [Bacillus subtilis strain ZKY05]
ATGAAGGAGATTGTGGATGAAAATATTTTAAATGAGGACTTAAAAGTGAAGCTCATTTCTTTTATCAAAGAAAAAAAACA
ATTTTCATTTGCAGAACTGGCTTATTACCATTACATAGCATTTGATGGAAAAAACGACAAAGCAATTGAGTTATTGGCGT
CAGGTATAGAACTTTTAATTTTATCTGCGGACATTTTTGACGATATTGAGGATAAGGACAATCTTCAGGCTTCTTGGATG
AAATTAGATCCTTCTATAGCAACTAACGCAGCTACCGCACTTTATACATTAAGTCTGCAAGTAATAGGTTCAGTCTCAAA
TCATCCAAAACTTTTAAGCCTTACTTTGCAATATTCACTCCAATCTTTACAAGGACAACATGTAGATTTGAATTTAACAG
CCTCATCAGAATCAGAGTATATTGAAATGATTAAACTTAAGTCGGGTTCTCTGGTAACATTGCCCAGTATTCTTGGTGTA
TATCTGGCAACTGGAGAATATAATGAAACAGTTGAGGAGTATTCACGTTATTTAGGTATAGTCGAGCAAATTGCAAATGA
TCACTATGGACTTTATTACCCTAACTATAATGACTTCAAAACTAGACATACGCTTGCCTTCAATTATCTTAAAAATAAAT
TTAACCAATCATCAATTGACTTATTAAATTTTTATGCGCAAGAAAATCATATGATAAATAATTTGGAAGATTTGAAGGGA
AAGTTAAGAGAATCAGGTGTAATACAATATTTGAATGTTATAAAAAATTTAGCAGTGGAAAATTTTAAGGAATCATTCAA
AAAACTGAGATTAGATGAACAAAGAAAAAATAAATTACTTATTCAATTATTAAGGGGGATTTAA

Domains

Predicted by InterProScan.

Polyprenyl synthetase (polyprenyl_synt)

(45-195)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB Q9FAF1

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comQ Bacillus subtilis subsp. subtilis str. 168

45

97.561

0.439