Detailed information    

insolico Bioinformatically predicted

Overview

Name   med   Type   Regulator
Locus tag   QNK10_RS06340 Genome accession   NZ_CP125982
Coordinates   1218353..1219306 (+) Length   317 a.a.
NCBI ID   WP_069837427.1    Uniprot ID   -
Organism   Bacillus subtilis strain ZKY05     
Function   regulation of regulators (predicted from homology)   
Competence regulation

Genomic Context

Location: 1213353..1224306
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QNK10_RS06310 (QNK10_06310) argF 1213894..1214853 (+) 960 WP_014479432.1 ornithine carbamoyltransferase -
  QNK10_RS06320 (QNK10_06320) yjzC 1216229..1216408 (+) 180 WP_003245356.1 YjzC family protein -
  QNK10_RS06325 (QNK10_06325) yjzD 1216455..1216640 (-) 186 WP_003245236.1 YjzD family protein -
  QNK10_RS06330 (QNK10_06330) - 1216889..1217623 (+) 735 WP_014479433.1 hypothetical protein -
  QNK10_RS06335 (QNK10_06335) - 1217705..1218262 (+) 558 WP_014479435.1 hypothetical protein -
  QNK10_RS06340 (QNK10_06340) med 1218353..1219306 (+) 954 WP_069837427.1 transcriptional regulator Med Regulator
  QNK10_RS06345 (QNK10_06345) comZ 1219321..1219512 (+) 192 WP_046380930.1 ComG operon transcriptional repressor ComZ Regulator
  QNK10_RS06350 (QNK10_06350) yjzB 1219542..1219781 (-) 240 WP_003232972.1 spore coat protein YjzB -
  QNK10_RS06355 (QNK10_06355) fabH 1219946..1220884 (+) 939 WP_003232971.1 beta-ketoacyl-ACP synthase III -
  QNK10_RS06360 (QNK10_06360) fabF 1220907..1222148 (+) 1242 WP_003244890.1 beta-ketoacyl-ACP synthase II -
  QNK10_RS06365 (QNK10_06365) yjaZ 1222224..1223009 (+) 786 WP_014479439.1 DUF2268 domain-containing protein -
  QNK10_RS06370 (QNK10_06370) appD 1223201..1224187 (+) 987 WP_003232965.1 oligopeptide ABC transporter ATP-binding protein AppD -

Sequence

Protein


Download         Length: 317 a.a.        Molecular weight: 35310.84 Da        Isoelectric Point: 4.6031

>NTDB_id=765810 QNK10_RS06340 WP_069837427.1 1218353..1219306(+) (med) [Bacillus subtilis strain ZKY05]
MITRLVMIFSVLLLLSGCGKTPFKGKIEKVGMLFPDTINDLVWGTKGYKGLLNIQSKYNVDVYYKEGVKTEEDIINAIED
FHKRGVNLLYGHGSEYAEVFNLVGEDYPDMEFVISNAKAKADNVTSVHFSGEAMGFFGGMTAAHMSKTNQVGVIASFTWQ
PEVDGFIKGAKYENPDIEVNTKYTDHWDDDTTAVKLYQKMKNEGADVVYPAGDGYNVPVIQQIKKDGLYAIGYVTDQSDL
GENTVLTSTVQNVDKAYEIIAEQFNKGTLEGGDHYYDLNTGVVEMGTFSPLVDQDFQQRIAKLIKTYNKTGELPKNE

Nucleotide


Download         Length: 954 bp        

>NTDB_id=765810 QNK10_RS06340 WP_069837427.1 1218353..1219306(+) (med) [Bacillus subtilis strain ZKY05]
TTGATCACAAGGCTTGTCATGATCTTTTCTGTCCTCCTTTTATTGAGTGGATGTGGAAAAACTCCGTTCAAAGGAAAAAT
TGAGAAGGTCGGCATGCTCTTTCCTGATACGATTAATGACCTCGTATGGGGCACAAAAGGGTATAAAGGATTACTGAATA
TACAATCCAAATACAATGTGGACGTCTATTATAAAGAAGGCGTTAAAACAGAAGAAGATATCATAAATGCGATTGAGGAT
TTTCATAAGAGGGGCGTCAATCTGCTCTACGGCCATGGGAGTGAATATGCTGAGGTGTTTAACTTGGTCGGCGAAGATTA
TCCAGATATGGAATTCGTCATTTCCAATGCGAAAGCGAAAGCTGATAATGTAACGAGTGTCCATTTTAGCGGGGAAGCAA
TGGGCTTTTTTGGAGGAATGACTGCTGCCCATATGTCGAAAACGAATCAGGTCGGTGTAATTGCTTCCTTTACGTGGCAG
CCTGAGGTGGACGGTTTTATCAAAGGGGCCAAGTATGAAAATCCGGATATAGAGGTAAATACGAAATATACGGATCATTG
GGATGATGATACAACAGCAGTAAAGCTTTATCAGAAAATGAAGAACGAAGGCGCGGATGTTGTGTATCCCGCCGGAGACG
GGTATAATGTTCCTGTTATTCAGCAAATCAAAAAAGACGGTCTTTATGCCATTGGTTACGTCACAGATCAATCGGATCTG
GGCGAGAATACCGTATTAACCAGCACGGTGCAAAATGTGGACAAGGCCTATGAAATCATTGCTGAACAATTTAATAAAGG
CACCCTTGAGGGCGGCGATCATTACTACGACCTGAACACGGGAGTCGTTGAGATGGGAACATTCAGCCCGCTCGTCGATC
AAGACTTTCAGCAAAGAATCGCCAAGCTGATCAAAACATACAACAAAACAGGCGAGCTGCCAAAAAACGAGTAA

Domains

Predicted by InterProScan.

ABC transporter substrate-binding protein PnrA-like (Bmp)

(27-317)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  med Bacillus subtilis subsp. subtilis str. 168

99.685

100

0.997