Detailed information
Bioinformatically predicted
Overview
| Name | fimU | Type | Machinery gene |
| Locus tag | H7K53_RS17385 | Genome accession | NZ_AP022077 |
| Coordinates | 3584400..3584873 (-) | Length | 157 a.a. |
| NCBI ID | WP_001214065.1 | Uniprot ID | N9K1Q3 |
| Organism | Acinetobacter baumannii strain WP4-W18-ESBL-11 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 3579400..3589873
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| H7K53_RS17370 (WP4W18E11_34000) | pilX | 3582029..3582847 (-) | 819 | WP_000149376.1 | PilX N-terminal domain-containing pilus assembly protein | Machinery gene |
| H7K53_RS17375 (WP4W18E11_34010) | pilW | 3582844..3583845 (-) | 1002 | WP_000079197.1 | PilW family protein | Machinery gene |
| H7K53_RS17380 (WP4W18E11_34020) | pilV | 3583846..3584406 (-) | 561 | WP_002194578.1 | type IV pilus modification protein PilV | Machinery gene |
| H7K53_RS17385 (WP4W18E11_34030) | fimU | 3584400..3584873 (-) | 474 | WP_001214065.1 | Tfp pilus assembly protein FimT/FimU | Machinery gene |
| H7K53_RS17390 (WP4W18E11_34040) | ispH | 3585043..3585993 (-) | 951 | WP_004742164.1 | 4-hydroxy-3-methylbut-2-enyl diphosphate reductase | - |
| H7K53_RS17395 (WP4W18E11_34050) | gmk | 3586116..3586745 (+) | 630 | WP_000015937.1 | guanylate kinase | - |
| H7K53_RS17400 (WP4W18E11_34060) | rpoZ | 3586818..3587096 (+) | 279 | WP_000135049.1 | DNA-directed RNA polymerase subunit omega | - |
| H7K53_RS17405 | - | 3587135..3587265 (+) | 131 | Protein_3412 | hypothetical protein | - |
| H7K53_RS17410 (WP4W18E11_34070) | - | 3587305..3589410 (+) | 2106 | WP_001117590.1 | bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase | - |
Sequence
Protein
Download Length: 157 a.a. Molecular weight: 16837.43 Da Isoelectric Point: 8.5355
>NTDB_id=76549 H7K53_RS17385 WP_001214065.1 3584400..3584873(-) (fimU) [Acinetobacter baumannii strain WP4-W18-ESBL-11]
MRGIIPQEGFTLVELMVTIAVMAIIALMAAPSMSNLLESKRLDANQRDLINTLSEAKSQAILGRQNVSVNLNSTASNTPT
SLNWQTASNNTLELKNIAADGTQSSLTTTTLAFNANGVVANITQDTLLSICNSRINKKKVIILTKLGTLVFKAEETC
MRGIIPQEGFTLVELMVTIAVMAIIALMAAPSMSNLLESKRLDANQRDLINTLSEAKSQAILGRQNVSVNLNSTASNTPT
SLNWQTASNNTLELKNIAADGTQSSLTTTTLAFNANGVVANITQDTLLSICNSRINKKKVIILTKLGTLVFKAEETC
Nucleotide
Download Length: 474 bp
>NTDB_id=76549 H7K53_RS17385 WP_001214065.1 3584400..3584873(-) (fimU) [Acinetobacter baumannii strain WP4-W18-ESBL-11]
ATGAGGGGAATTATTCCGCAAGAAGGGTTCACCTTGGTCGAGCTAATGGTGACGATTGCGGTCATGGCTATTATTGCACT
GATGGCTGCGCCATCAATGTCAAATTTATTAGAAAGTAAACGTTTAGATGCTAATCAAAGAGACTTAATCAACACTTTAT
CAGAAGCGAAAAGTCAGGCAATTTTAGGCCGTCAGAATGTTTCTGTTAACTTGAACTCAACAGCTTCAAATACACCCACT
TCATTAAATTGGCAGACAGCTTCTAATAATACTCTTGAGCTAAAAAATATAGCCGCTGATGGTACGCAAAGTTCTTTAAC
GACTACCACTTTAGCTTTTAATGCAAATGGAGTAGTGGCAAATATAACTCAAGATACGCTTTTATCTATTTGTAATTCTA
GAATAAATAAAAAGAAAGTCATTATTTTGACCAAGCTTGGCACTTTAGTTTTTAAGGCCGAGGAGACTTGTTAA
ATGAGGGGAATTATTCCGCAAGAAGGGTTCACCTTGGTCGAGCTAATGGTGACGATTGCGGTCATGGCTATTATTGCACT
GATGGCTGCGCCATCAATGTCAAATTTATTAGAAAGTAAACGTTTAGATGCTAATCAAAGAGACTTAATCAACACTTTAT
CAGAAGCGAAAAGTCAGGCAATTTTAGGCCGTCAGAATGTTTCTGTTAACTTGAACTCAACAGCTTCAAATACACCCACT
TCATTAAATTGGCAGACAGCTTCTAATAATACTCTTGAGCTAAAAAATATAGCCGCTGATGGTACGCAAAGTTCTTTAAC
GACTACCACTTTAGCTTTTAATGCAAATGGAGTAGTGGCAAATATAACTCAAGATACGCTTTTATCTATTTGTAATTCTA
GAATAAATAAAAAGAAAGTCATTATTTTGACCAAGCTTGGCACTTTAGTTTTTAAGGCCGAGGAGACTTGTTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| fimU | Acinetobacter baumannii D1279779 |
100 |
100 |
1 |