Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilS   Type   Regulator
Locus tag   O1449_RS01080 Genome accession   NZ_CP114264
Coordinates   222393..223958 (-) Length   521 a.a.
NCBI ID   WP_269238921.1    Uniprot ID   A0A9E9L5P5
Organism   Acinetobacter sp. TR3     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 217393..228958
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  O1449_RS01060 (O1449_01060) - 217562..218056 (+) 495 WP_269238918.1 putative molybdenum carrier protein -
  O1449_RS01065 (O1449_01065) gpmI 218175..219719 (+) 1545 WP_269229053.1 2,3-bisphosphoglycerate-independent phosphoglycerate mutase -
  O1449_RS01070 (O1449_01070) - 219729..220904 (+) 1176 WP_269229052.1 S41 family peptidase -
  O1449_RS01075 (O1449_01075) pilR 220946..222370 (-) 1425 WP_269238919.1 sigma-54 dependent transcriptional regulator Regulator
  O1449_RS01080 (O1449_01080) pilS 222393..223958 (-) 1566 WP_269238921.1 ATP-binding protein Regulator
  O1449_RS01085 (O1449_01085) - 223978..224613 (-) 636 WP_005163158.1 response regulator -
  O1449_RS01090 (O1449_01090) pbpG 224824..225891 (+) 1068 WP_269238922.1 D-alanyl-D-alanine endopeptidase PBP7/8 -
  O1449_RS01095 (O1449_01095) - 226052..226819 (+) 768 WP_269229048.1 hypothetical protein -
  O1449_RS01100 (O1449_01100) thrC 226888..228027 (-) 1140 WP_269238923.1 threonine synthase -

Sequence

Protein


Download         Length: 521 a.a.        Molecular weight: 59348.29 Da        Isoelectric Point: 6.7715

>NTDB_id=765283 O1449_RS01080 WP_269238921.1 222393..223958(-) (pilS) [Acinetobacter sp. TR3]
MLGKIASSVSQTVYRLGIWYSGYRLIISISLILIYLLTAEQLSTNYDYPFLYFYTLVCYICINIFQLFILKLIPLHVTKQ
LIFVFIVDIACLSIITFSAGGPNLQLSLLYVIIIFSSAILLNAHLSLIVTLFAVIMVVYQRFLGNFFDYNNLNNLGNSAL
LAFLFFVVHAIGRIAVQRFKILETLTFHQSIEIHQLQNINRYILEQIEDGYLVLDHSNHIVLSNPAANTLLGIQIPVSPE
KTPLLKWQPDLFELIKFSDLEDGEEFSFESQQSPYTINIRVKHLIVPEQSLILLILKDAQKLTQQVQQLKLAALGQLSAS
IAHEIRNPLAAIVQANELFKESDSHQQEMLCRMISKQARRIDNIVQDTLGMARNKPTEPQVIQLADFFESLLNEDLVDAK
HMIKLNLAERINILFDEKQLRQVLINLIRNALRHNAADAQFIEVNVDLKDGRTCIDVIDFGTGVAKRDISQLFKPFFSTE
IKGTGLGLYLSHTFCEANHAKLTYVERQQGACFRIECSKIH

Nucleotide


Download         Length: 1566 bp        

>NTDB_id=765283 O1449_RS01080 WP_269238921.1 222393..223958(-) (pilS) [Acinetobacter sp. TR3]
ATGTTGGGAAAAATTGCGTCATCAGTGTCCCAAACCGTTTATCGGCTCGGAATTTGGTATAGTGGATATCGACTGATTAT
TTCAATCAGTCTAATTCTTATTTACTTACTCACTGCGGAACAGCTTTCCACCAACTACGATTACCCTTTTTTATATTTCT
ATACGTTAGTCTGCTATATCTGTATCAACATTTTTCAACTCTTCATACTCAAGCTCATTCCATTACATGTTACGAAACAA
CTCATTTTCGTCTTTATTGTGGATATTGCCTGCTTGAGTATCATTACCTTCTCTGCGGGAGGACCCAACTTACAACTCAG
TTTGCTGTATGTGATTATTATTTTCTCATCTGCAATTCTATTAAATGCTCATCTTTCACTGATTGTGACGCTTTTTGCCG
TTATTATGGTGGTTTATCAACGTTTTCTTGGCAATTTCTTTGATTACAATAATTTAAATAACTTAGGTAATAGCGCATTA
CTTGCTTTCTTATTTTTTGTAGTACATGCAATTGGTCGTATTGCCGTTCAAAGATTTAAGATTTTAGAAACACTCACTTT
TCATCAGTCTATTGAAATTCATCAGCTGCAAAATATTAACCGCTATATTTTGGAGCAAATCGAAGATGGCTATTTGGTAT
TGGATCATAGCAACCATATTGTGTTGAGTAACCCAGCAGCCAACACATTATTAGGCATTCAAATCCCTGTTTCTCCAGAA
AAAACCCCTCTGCTCAAGTGGCAACCTGATTTATTTGAACTGATTAAATTTAGTGATTTAGAAGATGGTGAAGAATTTAG
TTTTGAATCACAACAAAGTCCTTATACGATCAATATCCGTGTTAAACACCTAATCGTCCCCGAACAATCATTAATTTTAC
TTATCTTGAAAGATGCACAAAAACTCACGCAACAAGTTCAACAATTAAAACTGGCCGCGCTTGGTCAACTCTCTGCAAGT
ATTGCACATGAAATTCGCAACCCTTTAGCGGCGATTGTGCAGGCCAATGAATTATTTAAAGAAAGTGATAGTCATCAACA
AGAAATGCTCTGTCGTATGATCAGCAAACAAGCTAGACGTATTGATAATATTGTACAAGACACATTAGGCATGGCACGCA
ACAAACCAACTGAGCCACAAGTCATTCAACTTGCTGATTTTTTTGAAAGCCTATTGAATGAAGATCTAGTCGATGCGAAA
CATATGATTAAACTCAATCTTGCAGAACGAATTAATATTCTTTTTGATGAGAAACAATTACGTCAAGTTTTAATTAATCT
GATTCGAAATGCCCTGCGGCACAATGCAGCTGATGCTCAATTTATTGAAGTGAATGTAGACTTAAAAGATGGCAGAACAT
GTATTGATGTGATTGATTTTGGTACAGGGGTCGCAAAACGAGATATTTCTCAGCTATTCAAACCATTTTTTAGTACCGAA
ATTAAAGGAACTGGTTTAGGATTGTATTTGTCTCATACTTTTTGTGAGGCAAATCATGCAAAGCTCACTTACGTAGAGCG
ACAACAAGGAGCATGTTTCAGGATTGAATGCTCAAAAATTCATTGA

Domains

Predicted by InterproScan.

Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c)

(416-516)

His Kinase A (phospho-acceptor) domain (HisKA)

(313-374)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilS Acinetobacter baumannii strain A118

65.698

99.04

0.651