Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilS   Type   Regulator
Locus tag   O1450_RS14915 Genome accession   NZ_CP114256
Coordinates   3075928..3077493 (+) Length   521 a.a.
NCBI ID   WP_269229050.1    Uniprot ID   -
Organism   Acinetobacter sp. TR11     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 3070928..3082493
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  O1450_RS14895 (O1450_14895) thrC 3071859..3072998 (+) 1140 WP_004659414.1 threonine synthase -
  O1450_RS14900 (O1450_14900) - 3073067..3073834 (-) 768 WP_269229048.1 hypothetical protein -
  O1450_RS14905 (O1450_14905) pbpG 3073995..3075062 (-) 1068 WP_269229049.1 D-alanyl-D-alanine endopeptidase PBP7/8 -
  O1450_RS14910 (O1450_14910) - 3075273..3075908 (+) 636 WP_005163158.1 response regulator -
  O1450_RS14915 (O1450_14915) pilS 3075928..3077493 (+) 1566 WP_269229050.1 ATP-binding protein Regulator
  O1450_RS14920 (O1450_14920) pilR 3077516..3078943 (+) 1428 WP_269229051.1 sigma-54 dependent transcriptional regulator Regulator
  O1450_RS14925 (O1450_14925) - 3078986..3080161 (-) 1176 WP_269229052.1 S41 family peptidase -
  O1450_RS14930 (O1450_14930) gpmI 3080171..3081715 (-) 1545 WP_269229053.1 2,3-bisphosphoglycerate-independent phosphoglycerate mutase -
  O1450_RS14935 (O1450_14935) - 3081834..3082220 (-) 387 WP_269229054.1 putative molybdenum carrier protein -
  O1450_RS16530 - 3082181..3082327 (-) 147 WP_331276166.1 putative molybdenum carrier protein -

Sequence

Protein


Download         Length: 521 a.a.        Molecular weight: 59368.28 Da        Isoelectric Point: 6.7715

>NTDB_id=765269 O1450_RS14915 WP_269229050.1 3075928..3077493(+) (pilS) [Acinetobacter sp. TR11]
MLGKIASSVSQTVYRLGIWYSGYRLIISISLILIYLLTAEQLSTNYDYPFLYFYTLVCYICINIFQLFILKLIPLHVTKQ
LIFVFIVDIACLSIITFSAGGPNLQLSLLYVIIIFSSAILLNAHLSLIVTLFAVIMVVYQRFLGNFFDYNNLNNLGNSAF
LAFLFFVVHAIGRIAVQRFKILETLTFHQSIEIHQLQNINRYILEQIEDGYLVLDHSNHIVLSNPAANTLLGIQIPVSPE
KTPLLKWQPDLFELIKFSDLEDGEEFSFESQQSPYTINVRVKHLIVPEQSLILLILKDAQKLTQQVQQLKLAALGQLSAS
IAHEIRNPLAAIVQANELFKESDSHQQEMLCRMISKQARRIDNIVQDTLGMARNKPTEPQVIQLADFFESLLNEDLVDAK
HMIKLNLAERINILFDEKQLRQVLINLIRNALRHNAADAQFIEVNVDLKDGRTCIDVIDFGTGVAKRDISQLFKPFFSTE
IKGTGLGLYLSHTFCEANHAKLTYVERQQGACFRIECSKIH

Nucleotide


Download         Length: 1566 bp        

>NTDB_id=765269 O1450_RS14915 WP_269229050.1 3075928..3077493(+) (pilS) [Acinetobacter sp. TR11]
ATGTTGGGAAAAATTGCGTCATCAGTGTCCCAAACCGTTTATCGGCTCGGAATTTGGTATAGTGGATATCGACTGATTAT
TTCAATCAGTCTAATTCTTATTTACTTACTCACTGCGGAACAGCTTTCCACCAACTACGATTACCCTTTTTTATATTTCT
ATACGTTAGTCTGCTATATCTGTATCAACATTTTTCAACTCTTCATACTCAAGCTCATTCCATTACATGTTACGAAACAA
CTCATTTTCGTCTTTATTGTGGATATTGCCTGCTTGAGTATCATTACCTTCTCTGCGGGAGGACCCAACTTACAACTCAG
TTTGCTGTATGTGATTATTATTTTCTCATCTGCAATTCTATTAAATGCCCACCTATCTCTCATCGTGACGCTTTTTGCTG
TTATTATGGTGGTTTACCAGCGTTTCCTTGGCAATTTCTTCGATTACAATAATTTAAATAACTTAGGCAATAGCGCATTT
CTTGCCTTTTTATTTTTTGTGGTTCATGCAATTGGTCGTATTGCCGTTCAAAGATTTAAGATTTTAGAAACACTCACTTT
TCATCAGTCTATTGAAATTCATCAGCTGCAAAATATTAACCGCTATATTTTGGAGCAAATCGAAGATGGCTATTTGGTAT
TAGATCATAGCAACCATATTGTGTTGAGTAACCCAGCAGCCAACACATTATTAGGCATTCAAATCCCTGTTTCTCCAGAA
AAAACTCCTCTGCTCAAATGGCAACCTGATTTATTTGAACTGATTAAATTTAGTGATTTAGAAGATGGTGAAGAATTTAG
TTTTGAATCACAACAAAGTCCTTATACGATCAATGTCCGTGTTAAACACCTAATCGTCCCCGAACAATCATTAATTTTAC
TTATCTTGAAAGATGCACAAAAACTCACGCAACAAGTTCAACAATTAAAACTGGCCGCGCTTGGTCAACTCTCTGCAAGT
ATTGCACATGAAATTCGCAACCCTTTAGCGGCGATTGTGCAGGCCAATGAATTATTTAAAGAAAGTGATAGTCATCAACA
AGAAATGCTCTGTCGTATGATCAGCAAACAAGCTAGACGTATTGATAATATTGTACAAGACACATTAGGCATGGCACGCA
ACAAACCAACTGAGCCACAAGTCATTCAACTTGCTGATTTTTTTGAAAGCCTATTGAATGAAGATCTAGTCGATGCGAAA
CATATGATTAAACTCAATCTTGCAGAACGAATTAATATTCTTTTTGATGAGAAACAATTACGTCAAGTTTTAATTAATCT
GATTCGAAATGCCCTGCGGCACAATGCAGCTGATGCTCAATTTATTGAAGTGAATGTAGACTTAAAAGATGGCAGAACAT
GTATTGATGTGATTGATTTTGGTACAGGGGTCGCAAAACGAGATATTTCTCAGCTATTCAAACCATTTTTTAGTACCGAA
ATTAAAGGAACTGGTTTAGGATTGTATTTGTCTCATACTTTTTGTGAGGCAAATCATGCAAAGCTCACTTACGTAGAGCG
ACAACAAGGAGCATGTTTCAGGATTGAATGCTCAAAAATTCATTGA

Domains

Predicted by InterproScan.

Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c)

(416-516)

His Kinase A (phospho-acceptor) domain (HisKA)

(313-374)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilS Acinetobacter baumannii strain A118

65.31

99.04

0.647