Detailed information    

insolico Bioinformatically predicted

Overview

Name   tonB2   Type   Machinery gene
Locus tag   O1450_RS13325 Genome accession   NZ_CP114256
Coordinates   2757491..2758378 (-) Length   295 a.a.
NCBI ID   WP_269228818.1    Uniprot ID   A0A9E9L5Q0
Organism   Acinetobacter sp. TR11     
Function   assembly of type IV pilus (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 2752491..2763378
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  O1450_RS13305 (O1450_13305) - 2753002..2754078 (+) 1077 WP_005218240.1 PhoH family protein -
  O1450_RS13310 (O1450_13310) ybeY 2754151..2754636 (+) 486 WP_087537278.1 rRNA maturation RNase YbeY -
  O1450_RS13315 (O1450_13315) - 2754648..2754947 (+) 300 WP_269228816.1 antibiotic biosynthesis monooxygenase -
  O1450_RS13320 (O1450_13320) - 2755020..2757212 (-) 2193 WP_269228817.1 TonB-dependent siderophore receptor -
  O1450_RS13325 (O1450_13325) tonB2 2757491..2758378 (-) 888 WP_269228818.1 TonB family protein Machinery gene
  O1450_RS13330 (O1450_13330) - 2758666..2759346 (+) 681 WP_004658922.1 hypothetical protein -
  O1450_RS13335 (O1450_13335) - 2759602..2760246 (+) 645 WP_269230474.1 DUF3108 domain-containing protein -
  O1450_RS13340 (O1450_13340) - 2760335..2760910 (+) 576 WP_269228819.1 xanthine phosphoribosyltransferase -
  O1450_RS13345 (O1450_13345) - 2760956..2761780 (-) 825 WP_269228820.1 YwqG family protein -
  O1450_RS13350 (O1450_13350) thyA 2761952..2762794 (+) 843 WP_046738249.1 thymidylate synthase -
  O1450_RS13355 (O1450_13355) - 2762816..2763325 (+) 510 WP_018677325.1 dihydrofolate reductase -

Sequence

Protein


Download         Length: 295 a.a.        Molecular weight: 33619.21 Da        Isoelectric Point: 7.5185

>NTDB_id=765262 O1450_RS13325 WP_269228818.1 2757491..2758378(-) (tonB2) [Acinetobacter sp. TR11]
MWNKRNFRSVLSPYWWQDPIFIGAVALAMLLHGAVLAIQFAMPSPTDTSTKEIAVTVRTSQEKVKDADFLAQADQKGSGD
FREAHRMSSDMPAPMEADATTGESELESLEKVQQKRELKFEEKVLMTVLSWQKQAEQTERKKTLDELQSQFQAKAAMVAS
LEAQYLQHQQNFSRKQRIKTVDGIQAKQDASAAYLDKFRQKVELYGNRYYPDEAKQRHLSGEVRLMVILNAEGGIRAIRL
IESSGHPILDEAAKASVRRGAPFGPFDNNMKKDISELRIIRTWRFDPVDAEFEVH

Nucleotide


Download         Length: 888 bp        

>NTDB_id=765262 O1450_RS13325 WP_269228818.1 2757491..2758378(-) (tonB2) [Acinetobacter sp. TR11]
ATGTGGAATAAAAGAAATTTTCGTTCAGTACTGTCCCCTTACTGGTGGCAAGATCCAATTTTTATCGGGGCAGTTGCGTT
AGCAATGCTTCTACATGGTGCTGTGCTTGCAATTCAGTTCGCAATGCCATCACCTACAGATACATCAACCAAAGAAATCG
CAGTTACGGTTCGTACAAGTCAAGAAAAAGTCAAAGATGCCGACTTCTTGGCGCAAGCTGATCAAAAAGGTTCAGGTGAT
TTTCGTGAAGCACATCGTATGTCGAGTGATATGCCAGCTCCGATGGAAGCAGATGCGACAACAGGAGAGTCAGAGCTCGA
GAGTTTAGAGAAAGTCCAGCAAAAACGAGAATTAAAATTTGAAGAAAAAGTGCTCATGACGGTTTTAAGCTGGCAGAAGC
AAGCAGAGCAAACTGAACGTAAAAAAACCTTAGATGAGTTACAGAGTCAATTTCAAGCCAAAGCCGCGATGGTTGCGAGC
TTGGAAGCACAATATTTACAACATCAGCAAAATTTTAGTCGTAAACAACGTATTAAAACAGTAGATGGGATTCAGGCAAA
ACAAGATGCATCAGCAGCTTATCTTGATAAATTTCGTCAGAAAGTTGAACTATATGGTAATCGTTATTATCCAGATGAAG
CGAAACAACGACATTTATCGGGTGAAGTGCGTTTAATGGTCATTCTGAATGCCGAAGGTGGAATTCGAGCAATTCGTCTT
ATAGAAAGTTCTGGACATCCCATTTTAGATGAAGCGGCAAAAGCTTCGGTGCGCCGTGGAGCACCTTTTGGACCCTTTGA
TAACAATATGAAAAAGGACATTTCTGAATTACGAATTATTCGAACATGGCGCTTTGATCCTGTCGATGCGGAATTTGAAG
TACATTAA

Domains

Predicted by InterproScan.

Gram-negative bacterial TonB protein C-terminal (TonB_C)

(207-273)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  tonB2 Acinetobacter baumannii D1279779

76.61

100

0.766