Detailed information NTG0764815

Bioinformatically predicted

Overview

• Name: degS
• Type: Regulator
• Locus tag: M1L51_RS16980
• Genome accession: NZ_CP114180
• Coordinates: 3490974..3492137 (-)
• Length: 387 a.a.
• NCBI ID: WP_007407484.1
• Uniprot ID: A3KLC1
• Organism: Bacillus velezensis strain DMW1
• Function: phosphorylation of DegU (predicted from homology) Competence regulation

Genomic Context

Location: 3485974..3497137

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
M1L51_RS16950	-	3486239..3486658 (-)	420	WP_012118571.1	TIGR03826 family flagellar region protein	-
M1L51_RS16955	comFC	3486732..3487421 (-)	690	WP_199910801.1	phosphoribosyltransferase family protein	Machinery gene
M1L51_RS16960	-	3487427..3487711 (-)	285	WP_003151389.1	late competence development ComFB family protein	-
M1L51_RS16965	comFA	3487769..3489154 (-)	1386	WP_053574011.1	DEAD/DEAH box helicase	Machinery gene
M1L51_RS16970	-	3489262..3490110 (-)	849	WP_053574012.1	DegV family protein	-
M1L51_RS16975	degU	3490208..3490897 (-)	690	WP_003219701.1	two-component system response regulator DegU	Regulator
M1L51_RS16980	degS	3490974..3492137 (-)	1164	WP_007407484.1	two-component sensor histidine kinase DegS	Regulator
M1L51_RS16985	-	3492360..3493007 (+)	648	WP_003151384.1	YigZ family protein	-
M1L51_RS16990	-	3493012..3494226 (+)	1215	WP_015418337.1	LCP family protein	-
M1L51_RS16995	-	3494325..3495401 (-)	1077	WP_003151382.1	glycosyltransferase family 4 protein	-
M1L51_RS17000	tuaH	3495534..3496730 (-)	1197	WP_053574013.1	teichuronic acid biosynthesis protein TuaH	-

Sequence

Protein

• Length: 387 a.a.
• Molecular weight: 45014.78 Da
• Isoelectric Point: 6.8616

>NTDB_id=764815 M1L51_RS16980 WP_007407484.1 3490974..3492137(-) (degS) [Bacillus velezensis strain DMW1]
MNKSKMDSKVLDSILMKMLKTVDGSKDEVFQIGEQSRQQYEQLVEELKQIKQQVYEVIELGDKLEVHTRHARNRLSEVSR
NFHKFSEEEIRNAYEKAHKLQVELTMIQQREKQLRERRDDLERRLLGLQEIIERSESLVSQITVVLNYLNQDLRQVGLLL
ADAQAKQDFGLRIIEAQEEERKRVSREIHDGPAQMLANVMMRSELIERIFRDRGTEDGFQEIRNLRQNVRNALYEVRRII
YDLRPMALDDLGLIPTLRKYLYTTEEYNGKVKIHFQCIGDTENQRLAPQFEVALFRLAQEAVTNALKHSESEEITVKVEV
TADFVVLIIKDNGKGFDIKDAKQKKNKSFGLLGMKERVDLLEGTITIDSKIGLGTFIMIKVPLSLGL

Nucleotide

• Length: 1164 bp

>NTDB_id=764815 M1L51_RS16980 WP_007407484.1 3490974..3492137(-) (degS) [Bacillus velezensis strain DMW1]
ATGAATAAATCGAAGATGGACTCCAAAGTTTTGGATTCTATACTTATGAAAATGCTGAAAACCGTGGACGGGAGTAAGGA
CGAGGTTTTTCAAATCGGAGAGCAGTCGCGCCAGCAATATGAGCAGCTGGTTGAAGAACTCAAACAGATCAAACAGCAGG
TCTACGAAGTCATTGAGCTGGGCGACAAACTTGAAGTTCATACGCGGCACGCACGAAACCGCTTGTCTGAAGTAAGCAGA
AATTTCCATAAGTTCAGCGAAGAAGAAATTCGCAACGCCTATGAAAAGGCGCACAAACTTCAAGTGGAACTGACGATGAT
CCAGCAGCGTGAAAAGCAGCTGCGGGAGCGCAGAGATGATTTAGAACGCCGGCTTTTGGGGCTTCAGGAAATCATTGAAC
GGTCAGAATCATTGGTCAGCCAAATAACCGTCGTTCTGAATTACCTGAATCAAGACCTTCGCCAAGTAGGGCTTCTTCTT
GCCGATGCGCAGGCTAAACAAGATTTCGGTTTAAGAATTATTGAAGCCCAAGAGGAAGAAAGAAAAAGAGTTTCCAGAGA
AATTCATGACGGTCCCGCGCAAATGCTGGCAAATGTCATGATGAGATCGGAATTAATTGAACGGATCTTCCGCGACCGCG
GCACGGAGGACGGATTTCAGGAAATCAGAAATCTGCGGCAGAATGTGCGGAATGCCCTTTACGAAGTCAGAAGGATTATA
TATGATTTAAGACCGATGGCATTGGACGATCTCGGGCTGATTCCGACACTGAGAAAATATCTTTATACAACTGAAGAATA
CAACGGAAAGGTGAAAATACATTTTCAGTGTATCGGAGACACGGAGAACCAAAGGCTTGCCCCGCAATTTGAAGTGGCGC
TTTTCCGTCTCGCTCAGGAAGCCGTCACAAATGCACTCAAGCATTCAGAATCAGAGGAAATTACAGTAAAAGTGGAAGTA
ACCGCTGATTTTGTCGTTCTCATCATTAAGGACAACGGAAAAGGCTTTGATATTAAGGATGCTAAACAAAAGAAAAACAA
GTCATTCGGCTTGCTGGGAATGAAAGAAAGAGTAGATCTGCTTGAAGGAACGATAACGATAGACTCTAAAATAGGTCTTG
GGACATTTATCATGATTAAGGTTCCGTTATCTCTCGGCCTATAA

Domains

Predicted by InterproScan.

• Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) (291-384)

• Sensor protein DegS (DegS) (12-170)

• Histidine kinase (HisKA_3) (180-248)

3D structure

• AlphaFold DB: A3KLC1

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
degS	Bacillus subtilis subsp. subtilis str. 168	95.584	99.483	0.951