Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   OZ428_RS31180 Genome accession   NZ_CP114115
Coordinates   6589995..6590402 (-) Length   135 a.a.
NCBI ID   WP_010564379.1    Uniprot ID   A0A7Y8D5M8
Organism   Pseudomonas sp. GXZC     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 6584995..6595402
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  OZ428_RS31165 (OZ428_31165) - 6586998..6589049 (-) 2052 WP_016976049.1 methyl-accepting chemotaxis protein -
  OZ428_RS31170 (OZ428_31170) - 6589046..6589570 (-) 525 WP_033897068.1 chemotaxis protein CheW -
  OZ428_RS31175 (OZ428_31175) pilH 6589583..6589948 (-) 366 WP_016976047.1 twitching motility response regulator PilH -
  OZ428_RS31180 (OZ428_31180) pilG 6589995..6590402 (-) 408 WP_010564379.1 twitching motility response regulator PilG Regulator
  OZ428_RS31185 (OZ428_31185) gshB 6590642..6591595 (+) 954 WP_028618297.1 glutathione synthase -
  OZ428_RS31190 (OZ428_31190) - 6591673..6592578 (+) 906 WP_133075457.1 energy transducer TonB -
  OZ428_RS31195 (OZ428_31195) - 6592646..6593215 (+) 570 WP_133075458.1 YqgE/AlgH family protein -
  OZ428_RS31200 (OZ428_31200) ruvX 6593215..6593652 (+) 438 WP_003195067.1 Holliday junction resolvase RuvX -
  OZ428_RS31205 (OZ428_31205) pyrR 6593726..6594232 (+) 507 WP_033897063.1 bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR -
  OZ428_RS31210 (OZ428_31210) - 6594257..6595261 (+) 1005 WP_016976042.1 aspartate carbamoyltransferase catalytic subunit -

Sequence

Protein


Download         Length: 135 a.a.        Molecular weight: 14906.40 Da        Isoelectric Point: 7.3842

>NTDB_id=764443 OZ428_RS31180 WP_010564379.1 6589995..6590402(-) (pilG) [Pseudomonas sp. GXZC]
MEQHSNALRVMVIDDSKTIRRTAETLLKNVGCDVITAIDGFDALARIVDHHPHIIFVDIMMPRLDGYQTCALVKNNPAFK
SIPVIMLSSKDGLFDKAKGRIVGVDQFLTKPFSKEELLGAIKAYVPGFAAVEQAH

Nucleotide


Download         Length: 408 bp        

>NTDB_id=764443 OZ428_RS31180 WP_010564379.1 6589995..6590402(-) (pilG) [Pseudomonas sp. GXZC]
ATGGAACAGCATTCCAACGCCTTGAGAGTGATGGTGATCGATGATTCGAAGACGATCCGCCGCACCGCTGAGACCTTGTT
GAAGAACGTCGGGTGCGATGTCATCACGGCCATCGACGGTTTCGATGCCCTGGCCCGGATTGTTGATCATCACCCGCACA
TTATTTTTGTCGACATCATGATGCCGCGCCTGGATGGCTATCAGACCTGCGCGCTGGTGAAGAACAACCCGGCGTTCAAG
TCGATCCCGGTGATCATGCTGTCGTCCAAGGATGGCCTGTTCGACAAGGCCAAGGGGCGCATCGTGGGGGTCGATCAGTT
TTTGACCAAGCCTTTCAGCAAGGAAGAACTGCTGGGCGCGATCAAGGCCTACGTGCCGGGGTTCGCCGCAGTAGAACAAG
CACACTGA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(10-121)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A7Y8D5M8

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

70.4

92.593

0.652
  vicR Streptococcus mutans UA159

38.889

93.333

0.363