Detailed information NTG0764400

Bioinformatically predicted

Overview

• Name: comEA
• Type: Machinery gene
• Locus tag: O0R52_RS13110
• Genome accession: NZ_CP114066
• Coordinates: 2604626..2605243 (-)
• Length: 205 a.a.
• NCBI ID: WP_106293667.1
• Uniprot ID: -
• Organism: Bacillus halotolerans strain B13
• Function: dsDNA binding to the cell surface (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2599626..2610243

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
O0R52_RS13080 (O0R52_13080)	rpsT	2599929..2600195 (+)	267	WP_010335003.1	30S ribosomal protein S20	-
O0R52_RS13085 (O0R52_13085)	holA	2600210..2601253 (-)	1044	WP_044154489.1	DNA polymerase III subunit delta	-
O0R52_RS13090 (O0R52_13090)	-	2601293..2601442 (-)	150	WP_125825438.1	hypothetical protein	-
O0R52_RS13095 (O0R52_13095)	-	2601483..2601617 (+)	135	WP_010335005.1	YqzM family protein	-
O0R52_RS13100 (O0R52_13100)	comEC	2601656..2603986 (-)	2331	WP_217827826.1	DNA internalization-related competence protein ComEC/Rec2	Machinery gene
O0R52_RS13105 (O0R52_13105)	-	2603990..2604559 (-)	570	WP_044154488.1	ComE operon protein 2	-
O0R52_RS13110 (O0R52_13110)	comEA	2604626..2605243 (-)	618	WP_106293667.1	helix-hairpin-helix domain-containing protein	Machinery gene
O0R52_RS13115 (O0R52_13115)	comER	2605327..2606148 (+)	822	WP_256766239.1	late competence protein ComER	-
O0R52_RS13120 (O0R52_13120)	-	2606213..2606956 (-)	744	WP_059293569.1	class I SAM-dependent DNA methyltransferase	-
O0R52_RS13125 (O0R52_13125)	rsfS	2606953..2607309 (-)	357	WP_044154484.1	ribosome silencing factor	-
O0R52_RS13130 (O0R52_13130)	yqeK	2607327..2607887 (-)	561	WP_024122116.1	bis(5'-nucleosyl)-tetraphosphatase (symmetrical) YqeK	-
O0R52_RS13135 (O0R52_13135)	-	2607877..2608446 (-)	570	WP_217827796.1	nicotinate-nucleotide adenylyltransferase	-
O0R52_RS13140 (O0R52_13140)	yhbY	2608457..2608747 (-)	291	WP_024122118.1	ribosome assembly RNA-binding protein YhbY	-
O0R52_RS13145 (O0R52_13145)	aroE	2608747..2609583 (-)	837	WP_215510323.1	shikimate dehydrogenase	-

Sequence

Protein

• Length: 205 a.a.
• Molecular weight: 21983.78 Da
• Isoelectric Point: 4.8667

>NTDB_id=764400 O0R52_RS13110 WP_106293667.1 2604626..2605243(-) (comEA) [Bacillus halotolerans strain B13]
MNWLNQHKTIIMSAGSAAVLIAVLCLFFFSGHNKEPVKQVVSSEKENAEVKQEATKDKAEENIVIDIKGAVKHPGVYEMH
TGDRVSQAIEKAGGIGEKADETQVNLAELLQDGTVVYIPSEGEEAAQQAAGGAVQSSKGKETLVNINTATLEDLQNISGV
GPSKAEAIIAYREENGRFQTIEDITKVSGIGEKSFEKIKSSITVK

Nucleotide

• Length: 618 bp

>NTDB_id=764400 O0R52_RS13110 WP_106293667.1 2604626..2605243(-) (comEA) [Bacillus halotolerans strain B13]
TTGAATTGGTTGAACCAACATAAAACGATAATCATGTCAGCGGGCTCTGCTGCTGTTCTCATTGCAGTTCTTTGCCTCTT
TTTTTTCAGCGGACATAACAAAGAGCCTGTAAAACAAGTTGTATCTAGTGAAAAGGAAAATGCCGAGGTCAAGCAGGAAG
CAACAAAAGACAAAGCGGAAGAAAATATTGTAATTGATATAAAAGGCGCCGTTAAGCATCCCGGCGTTTATGAAATGCAT
ACGGGAGACAGAGTATCGCAGGCTATTGAGAAAGCAGGCGGCATTGGTGAAAAAGCAGATGAAACGCAAGTGAATTTGGC
GGAACTTTTACAGGACGGTACAGTGGTGTATATACCGAGTGAGGGAGAAGAGGCGGCGCAGCAAGCGGCCGGCGGCGCTG
TACAAAGCAGTAAGGGGAAGGAGACATTGGTCAATATCAACACAGCAACATTAGAGGATTTACAAAACATTTCGGGAGTA
GGGCCTTCAAAAGCCGAAGCGATTATTGCCTATCGGGAAGAGAACGGGCGTTTCCAGACAATTGAAGATATCACAAAGGT
TTCGGGAATTGGCGAAAAATCTTTTGAAAAAATAAAGTCTTCCATTACAGTAAAGTGA

Domains

Predicted by InterproScan.

• Helix-hairpin-helix motif (HHH_3) (141-203)

• SLBB domain (SLBB) (64-119)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comEA	Bacillus subtilis subsp. subtilis str. 168	77.184	100	0.776
comEA	Staphylococcus aureus MW2	37.727	100	0.405
comEA	Staphylococcus aureus N315	36.937	100	0.4
comEA/celA/cilE	Streptococcus pneumoniae TIGR4	37.264	100	0.385
comEA	Latilactobacillus sakei subsp. sakei 23K	35.321	100	0.376