Detailed information    

insolico Bioinformatically predicted

Overview

Name   ceuB   Type   Machinery gene
Locus tag   O0R52_RS02180 Genome accession   NZ_CP114066
Coordinates   429124..430074 (+) Length   316 a.a.
NCBI ID   WP_099043690.1    Uniprot ID   -
Organism   Bacillus halotolerans strain B13     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 424124..435074
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  O0R52_RS02155 (O0R52_02155) rapC 425513..426661 (+) 1149 WP_044161883.1 response regulator aspartate phosphatase RapC Regulator
  O0R52_RS02160 (O0R52_02160) phrC 426645..426767 (+) 123 WP_010333023.1 PhrC/PhrF family phosphatase-inhibitory pheromone Regulator
  O0R52_RS02165 (O0R52_02165) - 426872..426964 (-) 93 WP_024120214.1 YjcZ family sporulation protein -
  O0R52_RS02170 (O0R52_02170) - 427111..427221 (-) 111 WP_024120215.1 YjcZ family sporulation protein -
  O0R52_RS02175 (O0R52_02175) - 427374..428738 (-) 1365 WP_269107780.1 aspartate kinase -
  O0R52_RS02180 (O0R52_02180) ceuB 429124..430074 (+) 951 WP_099043690.1 petrobactin ABC transporter permease YclN Machinery gene
  O0R52_RS02185 (O0R52_02185) yclO 430067..431014 (+) 948 WP_227534189.1 petrobactin ABC transporter permease YclO -
  O0R52_RS02190 (O0R52_02190) yclP 431008..431766 (+) 759 WP_024120218.1 petrobactin ABC transporter ATP-binding protein YclP -
  O0R52_RS02195 (O0R52_02195) - 431788..432741 (+) 954 WP_215510863.1 siderophore ABC transporter substrate-binding protein -
  O0R52_RS02200 (O0R52_02200) - 432789..434207 (-) 1419 WP_044161878.1 MDR family MFS transporter -

Sequence

Protein


Download         Length: 316 a.a.        Molecular weight: 35001.47 Da        Isoelectric Point: 9.8154

>NTDB_id=764358 O0R52_RS02180 WP_099043690.1 429124..430074(+) (ceuB) [Bacillus halotolerans strain B13]
MKLRYLFFLLIILAVTSVFIGVEDLSPLDLFDLSKEEASTLFASRLPRLISILIAGMSMSICGLIMQQITRNKFVSPTTA
GTMDWARLGILISLLLFTSASPLMKMMIAFVFALVGNFLFMKILEKIKFNDTIFIPLVGLMLGNIVSSIATFIAYKYDLI
QNVSSWLQGDFSLVVKGRYELLYLSIPLVIIAYVYADKFTVAGMGESFSVNLGLKYKRVVNIGLIIVSLITSLVILTVGM
LPFLGLIIPNIVSIYRGDNLKNSLPHTALLGAVFVLFCDILGRVIIFPYEISIGLMVGIIGSGIFLFMLLRRKAYA

Nucleotide


Download         Length: 951 bp        

>NTDB_id=764358 O0R52_RS02180 WP_099043690.1 429124..430074(+) (ceuB) [Bacillus halotolerans strain B13]
ATGAAGCTACGTTACTTATTTTTTCTGCTTATCATATTAGCAGTCACTTCTGTATTTATCGGCGTAGAAGATTTGTCGCC
GCTTGATCTCTTTGATTTAAGCAAAGAAGAGGCGTCAACGCTCTTTGCCAGCCGTTTGCCGCGGCTGATCAGCATTCTGA
TCGCGGGCATGAGCATGAGCATCTGCGGCCTGATTATGCAGCAGATCACCAGAAACAAATTCGTGTCACCGACAACGGCC
GGCACGATGGACTGGGCGAGGCTGGGAATCTTAATATCCTTGCTTCTGTTTACATCGGCAAGTCCTTTAATGAAAATGAT
GATTGCTTTTGTCTTTGCTTTAGTCGGCAATTTTCTGTTTATGAAAATTCTTGAAAAAATCAAGTTTAACGACACCATCT
TTATTCCGCTTGTCGGTTTAATGCTCGGGAATATCGTCAGCTCAATCGCGACGTTTATCGCGTATAAATATGACCTGATC
CAGAACGTGTCATCATGGCTTCAGGGGGATTTCTCCTTAGTTGTGAAAGGGAGATACGAGCTTCTTTATCTGAGTATTCC
GCTTGTCATCATTGCCTATGTTTATGCGGATAAATTTACAGTGGCGGGTATGGGAGAAAGCTTTTCTGTCAACCTCGGCC
TCAAGTATAAACGGGTTGTGAACATCGGGCTCATTATCGTATCCCTGATTACGTCACTTGTCATTTTGACTGTCGGTATG
CTTCCGTTTCTCGGTTTAATCATCCCGAACATTGTATCGATTTACAGAGGAGACAACCTGAAAAACAGCCTGCCGCACAC
TGCGCTGCTGGGAGCGGTTTTTGTTCTGTTTTGCGATATATTGGGCAGAGTCATTATCTTCCCATATGAAATCTCGATTG
GTCTGATGGTCGGAATCATCGGCAGCGGCATTTTCCTGTTTATGCTGTTAAGGAGAAAAGCGTATGCGTAA

Domains

Predicted by InterproScan.

FecCD transport family (FecCD)

(9-311)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

54.114

100

0.541