Detailed information    

insolico Bioinformatically predicted

Overview

Name   nin/comJ   Type   Regulator
Locus tag   O0R52_RS01965 Genome accession   NZ_CP114066
Coordinates   368524..368922 (-) Length   132 a.a.
NCBI ID   WP_024120177.1    Uniprot ID   A0A7G7UCH7
Organism   Bacillus halotolerans strain B13     
Function   represses the expression of nucA (predicted from homology)   
Competence regulation

Genomic Context

Location: 363524..373922
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  O0R52_RS01940 (O0R52_01940) - 364081..365217 (+) 1137 WP_269107766.1 zinc-dependent alcohol dehydrogenase -
  O0R52_RS01945 (O0R52_01945) - 365230..365685 (+) 456 WP_059291986.1 RDD family protein -
  O0R52_RS01950 (O0R52_01950) - 365797..366102 (+) 306 WP_414017626.1 YckD family protein -
  O0R52_RS01955 (O0R52_01955) - 366254..366982 (+) 729 WP_269107768.1 AAA family ATPase -
  O0R52_RS01960 (O0R52_01960) - 367055..368488 (+) 1434 WP_044161931.1 glycoside hydrolase family 1 protein -
  O0R52_RS01965 (O0R52_01965) nin/comJ 368524..368922 (-) 399 WP_024120177.1 competence protein ComJ Regulator
  O0R52_RS01970 (O0R52_01970) nucA/comI 368949..369386 (-) 438 WP_044161928.1 DNA-entry nuclease Machinery gene
  O0R52_RS01975 (O0R52_01975) tlpC 369571..371295 (-) 1725 WP_044161927.1 methyl-accepting chemotaxis protein TlpC -
  O0R52_RS01980 (O0R52_01980) hxlB 371404..371961 (-) 558 WP_256766631.1 6-phospho-3-hexuloisomerase -
  O0R52_RS01985 (O0R52_01985) hxlA 371967..372599 (-) 633 WP_003224929.1 3-hexulose-6-phosphate synthase -
  O0R52_RS01990 (O0R52_01990) hxlR 372831..373193 (+) 363 WP_044161922.1 transcriptional activator HxlR -

Sequence

Protein


Download         Length: 132 a.a.        Molecular weight: 14945.86 Da        Isoelectric Point: 4.5022

>NTDB_id=764354 O0R52_RS01965 WP_024120177.1 368524..368922(-) (nin/comJ) [Bacillus halotolerans strain B13]
MIKSWKPQELTISYHQFTVFQKGSAPPVIDWTDEAIEKGYAEADEAISFEAQRNSKVYILLRLNSSETVASYEKKVTVPF
HVTTDGIEIESIMSKRLSFDLPKGDYQFTCYTVPAELSDLHADTYIIDAVSV

Nucleotide


Download         Length: 399 bp        

>NTDB_id=764354 O0R52_RS01965 WP_024120177.1 368524..368922(-) (nin/comJ) [Bacillus halotolerans strain B13]
TTGATCAAATCATGGAAGCCGCAAGAACTGACGATTTCATATCATCAATTTACTGTATTTCAAAAGGGTTCCGCACCGCC
AGTCATCGATTGGACAGATGAAGCAATTGAAAAAGGTTATGCGGAAGCGGACGAAGCCATTTCGTTTGAGGCACAGCGGA
ATTCAAAGGTATATATTCTTTTGCGCCTTAACAGTTCAGAAACAGTCGCATCCTATGAAAAAAAAGTGACTGTTCCTTTT
CACGTCACAACAGACGGAATTGAAATTGAAAGCATCATGTCCAAGAGGCTGTCCTTTGACCTTCCTAAAGGAGACTATCA
ATTCACATGCTACACTGTACCAGCTGAGCTGTCAGATCTGCACGCTGACACTTATATCATTGATGCTGTTTCCGTCTAA

Domains

Predicted by InterproScan.

Competence protein J (ComJ) (ComJ)

(9-129)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A7G7UCH7

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  nin/comJ Bacillus subtilis subsp. subtilis str. 168

87.121

100

0.871