Detailed information NTG0764164

Bioinformatically predicted

Overview

• Name: sepM
• Type: Regulator
• Locus tag: QMY17_RS13815
• Genome accession: NZ_CP125812
• Coordinates: 2570379..2571404 (-)
• Length: 341 a.a.
• NCBI ID: WP_003245451.1
• Uniprot ID: O34470
• Organism: Bacillus subtilis strain N3378-3At
• Function: processing of CSP (predicted from homology) Competence regulation

Genomic Context

Location: 2565379..2576404

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
QMY17_RS13780	panEA	2565864..2566760 (-)	897	WP_014479721.1	2-dehydropantoate 2-reductase	-
QMY17_RS13785	ylbP	2566920..2567402 (+)	483	WP_014476736.1	N-acetyltransferase	-
QMY17_RS13790	gerR	2567459..2568040 (-)	582	WP_014479720.1	sporulation specific transcriptional regulator GerR	-
QMY17_RS13795	rpmF	2568186..2568365 (-)	180	WP_003154457.1	50S ribosomal protein L32	-
QMY17_RS13800	ylbN	2568387..2568905 (-)	519	WP_014479718.1	YceD family protein	-
QMY17_RS13805	-	2568933..2569118 (+)	186	WP_003232215.1	hypothetical protein	-
QMY17_RS13810	tmcAL	2569115..2570362 (+)	1248	WP_014479717.1	nucleotidyltransferase	-
QMY17_RS13815	sepM	2570379..2571404 (-)	1026	WP_003245451.1	protease DdcP	Regulator
QMY17_RS13820	ylbK	2571406..2572188 (-)	783	WP_003232221.1	patatin family protein	-
QMY17_RS13825	spoVV	2572369..2573595 (+)	1227	WP_014479716.1	dipicolinic acid transporter SpoVV	-
QMY17_RS13830	coaD	2573606..2574091 (-)	486	WP_003245283.1	pantetheine-phosphate adenylyltransferase	-
QMY17_RS13835	rsmD	2574096..2574650 (-)	555	WP_033881642.1	16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	-
QMY17_RS13840	ylbG	2574973..2575245 (-)	273	WP_009967171.1	YlbG family protein	-
QMY17_RS13845	ylbF	2575300..2575749 (-)	450	WP_003221370.1	regulatory iron-sulfur-containing complex subunit RicF	Regulator
QMY17_RS13850	ylbE	2575865..2576104 (-)	240	WP_003232231.1	YlbE-like family protein	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37651.23 Da
• Isoelectric Point: 6.5347

>NTDB_id=764164 QMY17_RS13815 WP_003245451.1 2570379..2571404(-) (sepM) [Bacillus subtilis strain N3378-3At]
MLRKKHFSWMLVILILIAVLSFIKLPYYITKPGEATELASLIKVEGGYPEKGSLSLMTVKVGPANPFTYVWAKMHPYYEI
VPDESIKEEGESDKEYMKRQLQMMKSSQENAVIAAYQKAGKKVSYSFNGIYASSVVENMPAKGKIEVGDKIISADGKNYQ
SAEKLIDYISSKKAGDKVTLKIEREEKEKRVTLTLKQFPDEPDRAGIGVSLYTDRNVKVEPDIDFEIENIGGPSAGLMMS
LEIYNQLTKPDETKGYDIAGTGTIDVDGKVGPIGGIDQKVVAADKAGKDIFFAPNQNGASNSDYKNAVKTAKDIDSNMKI
VPVDTMQDAIDYLNKLKAKST

Nucleotide

• Length: 1026 bp

>NTDB_id=764164 QMY17_RS13815 WP_003245451.1 2570379..2571404(-) (sepM) [Bacillus subtilis strain N3378-3At]
TTGCTACGTAAAAAACATTTTAGCTGGATGCTCGTCATCCTCATACTGATCGCCGTTTTATCATTTATAAAACTTCCATA
CTATATTACAAAACCGGGAGAAGCGACAGAGCTTGCTTCATTGATAAAAGTGGAGGGAGGCTACCCGGAAAAAGGAAGCC
TGTCCTTAATGACTGTTAAAGTGGGACCGGCTAATCCGTTTACATATGTGTGGGCAAAGATGCACCCTTATTATGAAATT
GTTCCTGATGAGAGCATTAAGGAGGAAGGCGAGTCAGATAAGGAGTATATGAAAAGACAGCTCCAAATGATGAAAAGCTC
GCAAGAAAATGCGGTTATAGCCGCCTATCAAAAGGCAGGAAAAAAAGTCAGCTATTCCTTTAACGGCATATACGCAAGCT
CTGTTGTAGAAAACATGCCGGCAAAAGGGAAAATAGAAGTCGGTGATAAAATCATCAGCGCAGACGGCAAAAACTATCAG
TCTGCTGAAAAGCTAATTGATTATATCAGCAGCAAAAAAGCGGGAGATAAAGTCACGTTAAAGATCGAAAGAGAAGAAAA
AGAAAAGCGTGTCACCCTTACGTTAAAACAATTTCCTGATGAGCCGGATCGGGCAGGAATCGGAGTTTCGCTTTATACAG
ACAGAAACGTGAAGGTAGAGCCTGATATTGATTTTGAAATTGAAAATATTGGCGGTCCGTCAGCAGGGTTAATGATGTCC
CTTGAAATCTATAATCAGCTGACAAAACCAGACGAAACAAAAGGCTACGATATTGCGGGAACAGGTACCATTGATGTTGA
TGGGAAAGTAGGCCCGATCGGCGGCATTGATCAAAAAGTCGTCGCCGCAGACAAAGCCGGAAAAGACATTTTCTTCGCGC
CAAATCAAAACGGCGCCAGCAATTCCGATTATAAGAACGCAGTAAAAACAGCAAAAGATATTGATTCAAATATGAAGATT
GTGCCTGTTGATACCATGCAGGATGCGATTGATTATTTGAATAAGCTGAAAGCGAAAAGCACCTGA

Domains

Predicted by InterProScan.

• Lon protease (S16) C-terminal proteolytic domain (Lon_C) (232-331)

• Peptidase family M50 (Peptidase_M50) (59-220)

• PDZ domain (PDZ_2) (128-195)

3D structure

• PDB: 2KJP

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
sepM	Streptococcus mutans UA159	39.143	100	0.402