Detailed information    

insolico Bioinformatically predicted

Overview

Name   eeP   Type   Regulator
Locus tag   QMY17_RS13050 Genome accession   NZ_CP125812
Coordinates   2418900..2420168 (-) Length   422 a.a.
NCBI ID   WP_010886508.1    Uniprot ID   O31754
Organism   Bacillus subtilis strain N3378-3At     
Function   processing of ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 2413900..2425168
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QMY17_RS13045 proS 2417173..2418867 (-) 1695 WP_003231918.1 proline--tRNA ligase -
  QMY17_RS13050 eeP 2418900..2420168 (-) 1269 WP_010886508.1 RIP metalloprotease RseP Regulator
  QMY17_RS13055 dxr 2420175..2421326 (-) 1152 WP_014479799.1 1-deoxy-D-xylulose-5-phosphate reductoisomerase -
  QMY17_RS13060 cdsA 2421388..2422197 (-) 810 WP_031600506.1 phosphatidate cytidylyltransferase -
  QMY17_RS13065 uppS 2422201..2422983 (-) 783 WP_003231925.1 isoprenyl transferase -
  QMY17_RS13070 frr 2423114..2423671 (-) 558 WP_003231927.1 ribosome recycling factor -
  QMY17_RS13075 pyrH 2423673..2424395 (-) 723 WP_003220923.1 UMP kinase -

Sequence

Protein


Download         Length: 422 a.a.        Molecular weight: 46743.53 Da        Isoelectric Point: 5.0797

>NTDB_id=764156 QMY17_RS13050 WP_010886508.1 2418900..2420168(-) (eeP) [Bacillus subtilis strain N3378-3At]
MFVNTVIAFIIIFGTLVFFHELGHLLLAQRAGILCREFAIGFGPKIFSFKKNETVYTIRLLPVGGFVRMAGEDPEMIEVK
PGYTVGLLFNKEDQVEKVIINQKEKYPDALVIEVETADLEHDMKITGYEQGKEDELSSFTVSETSFFIVDGEEVQIAPYN
RQFGSKPVWQRIKAIAAGPIMNFILAYVILVMLGLIQGVPSNEPMLGQLTDNGRAAEAGLKEGDYIQSINGEKMRSWTDI
VSAVKENPEKEMDVAVKRDNKTLHISVTPEAVKDENKKTIGRFGSYAPTEKGVLSAVAYGATSTVDVTKAILTNLSKLVT
GQFKLDMLSGPVGIYDMTDQVAKTGIVNLFQFAAFLSINLGIVNLLPIPALDGGRLLFLFIEAIRGKPINREKEAFVVFI
GVAFLMLLMLVVTWNDIQRLFL

Nucleotide


Download         Length: 1269 bp        

>NTDB_id=764156 QMY17_RS13050 WP_010886508.1 2418900..2420168(-) (eeP) [Bacillus subtilis strain N3378-3At]
ATGTTCGTGAATACAGTTATAGCGTTTATCATTATTTTCGGAACGCTCGTTTTCTTCCATGAACTGGGCCATTTATTGCT
AGCCCAAAGAGCGGGAATTCTCTGCCGTGAATTTGCGATCGGCTTCGGTCCAAAGATTTTTTCTTTCAAAAAAAATGAAA
CAGTTTATACGATCAGGCTGCTTCCGGTCGGCGGATTTGTTCGTATGGCCGGCGAAGATCCGGAAATGATTGAGGTGAAA
CCCGGATACACGGTCGGGCTTCTGTTTAATAAGGAAGATCAAGTTGAGAAAGTCATCATCAATCAAAAGGAAAAATATCC
GGATGCTTTAGTCATTGAAGTGGAAACAGCGGATTTAGAGCATGACATGAAGATCACCGGTTATGAACAGGGGAAAGAGG
ACGAACTTTCCAGCTTTACTGTCAGCGAAACATCCTTTTTTATTGTAGACGGAGAAGAAGTGCAGATTGCGCCGTATAAT
CGCCAATTTGGTTCCAAACCTGTGTGGCAGCGGATTAAAGCAATTGCTGCAGGGCCGATTATGAACTTTATTTTAGCTTA
CGTCATTTTAGTGATGCTTGGGCTGATTCAAGGCGTACCGTCAAATGAACCTATGCTCGGGCAGCTGACAGACAATGGAC
GGGCAGCTGAAGCAGGGCTAAAAGAAGGGGATTATATCCAAAGCATTAACGGAGAGAAAATGAGGTCTTGGACTGACATT
GTCTCCGCTGTAAAAGAAAACCCGGAGAAAGAAATGGACGTTGCAGTAAAAAGAGATAACAAAACGCTTCATATTTCGGT
GACTCCGGAAGCTGTTAAAGATGAGAACAAAAAAACAATCGGACGTTTCGGTTCCTATGCGCCGACTGAAAAAGGCGTAC
TCTCAGCGGTTGCTTACGGCGCGACATCAACAGTTGATGTCACCAAAGCCATTTTAACCAATCTGAGCAAATTAGTAACA
GGCCAATTTAAACTCGATATGCTGTCAGGTCCTGTCGGCATATATGACATGACAGACCAAGTGGCGAAAACAGGGATCGT
GAATTTATTTCAGTTTGCGGCGTTTTTAAGCATTAATCTTGGGATTGTCAACCTGCTTCCGATTCCGGCACTTGACGGAG
GAAGACTGTTGTTTCTATTTATTGAAGCGATTCGGGGCAAACCGATTAACAGGGAAAAAGAAGCATTTGTTGTGTTTATC
GGAGTAGCTTTCTTAATGCTTCTTATGCTGGTTGTCACATGGAACGATATCCAGCGGCTGTTTTTGTAA

Domains

Predicted by InterProScan.

Peptidase family M50 (Peptidase_M50)

(8-408)

PDZ domain (PDZ_6)

(212-258)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB O31754

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  eeP Streptococcus thermophilus LMD-9

39.211

100

0.4
  eeP Streptococcus thermophilus LMG 18311

39.344

100

0.398