Detailed information    

insolico Bioinformatically predicted

Overview

Name   letA   Type   Regulator
Locus tag   QMY17_RS02325 Genome accession   NZ_CP125812
Coordinates   456275..456649 (+) Length   124 a.a.
NCBI ID   WP_003227621.1    Uniprot ID   A0A9W5LLN9
Organism   Bacillus subtilis strain N3378-3At     
Function   regulate competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 451275..461649
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QMY17_RS02305 acdA 451829..452968 (+) 1140 WP_014481201.1 acyl-CoA dehydrogenase AcdA -
  QMY17_RS02310 rpoE 453151..453657 (+) 507 WP_014481200.1 DNA-directed RNA polymerase subunit delta -
  QMY17_RS02315 pyrG 453899..455506 (+) 1608 WP_003227612.1 glutamine hydrolyzing CTP synthase -
  QMY17_RS02320 ywjG 455588..456109 (-) 522 WP_014481199.1 DUF2529 domain-containing protein -
  QMY17_RS02325 letA 456275..456649 (+) 375 WP_003227621.1 sporulation initiation phosphotransferase Spo0F Regulator
  QMY17_RS02330 fbaA 456830..457687 (+) 858 WP_003243339.1 class II fructose-bisphosphate aldolase -
  QMY17_RS02335 fsa 457807..458445 (+) 639 WP_003227626.1 fructose-6-phosphate aldolase -
  QMY17_RS02340 - 458445..458582 (+) 138 WP_014481198.1 hypothetical protein -
  QMY17_RS02345 murAB 458823..460112 (+) 1290 WP_003227628.1 UDP-N-acetylglucosamine 1-carboxyvinyltransferase -
  QMY17_RS02350 glpX 460143..461108 (+) 966 WP_014481197.1 class II fructose-bisphosphatase -
  QMY17_RS02355 - 461323..461484 (+) 162 WP_003227632.1 hypothetical protein -

Sequence

Protein


Download         Length: 124 a.a.        Molecular weight: 14227.68 Da        Isoelectric Point: 4.6400

>NTDB_id=764086 QMY17_RS02325 WP_003227621.1 456275..456649(+) (letA) [Bacillus subtilis strain N3378-3At]
MMNEKILIVDDQYGIRILLNEVFNKEGYQTFQAANGLQALDIVTKERPDLVLLDMKIPGMDGIEILKRMKVIDENIRVII
MTAYGELDMIQESKELGALTHFAKPFDIDEIRDAVKKYLPLKSN

Nucleotide


Download         Length: 375 bp        

>NTDB_id=764086 QMY17_RS02325 WP_003227621.1 456275..456649(+) (letA) [Bacillus subtilis strain N3378-3At]
ATGATGAATGAAAAAATTTTAATCGTTGATGATCAATACGGCATTCGTATTTTGCTAAATGAAGTGTTCAATAAAGAAGG
CTACCAGACGTTTCAGGCTGCGAACGGCCTGCAGGCGCTTGACATTGTGACAAAAGAACGGCCCGACCTTGTGCTTTTGG
ACATGAAAATTCCCGGCATGGACGGAATCGAAATCTTAAAACGGATGAAGGTCATTGACGAAAACATCCGGGTCATTATC
ATGACGGCATACGGAGAGCTCGACATGATCCAAGAATCGAAGGAATTGGGCGCCCTGACGCACTTTGCCAAGCCGTTTGA
CATCGACGAAATCAGAGACGCCGTCAAAAAATATCTGCCCCTGAAGTCTAACTGA

Domains

Predicted by InterProScan.

Response regulator receiver domain (Response_reg)

(6-116)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A9W5LLN9

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  letA Legionella pneumophila str. Paris

38.462

94.355

0.363
  letA Legionella pneumophila strain ERS1305867

38.462

94.355

0.363