Detailed information    

insolico Bioinformatically predicted

Overview

Name   vicX   Type   Regulator
Locus tag   QMY17_RS00510 Genome accession   NZ_CP125812
Coordinates   91675..92469 (+) Length   264 a.a.
NCBI ID   WP_003226939.1    Uniprot ID   A0ABU0V6L5
Organism   Bacillus subtilis strain N3378-3At     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 86675..97469
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QMY17_RS00490 walR 86917..87624 (+) 708 WP_003244363.1 cell wall metabolism DNA-binding response regulator WalR -
  QMY17_RS00495 walK 87632..89467 (+) 1836 WP_009968432.1 cell wall metabolism sensor histidine kinase WalK -
  QMY17_RS00500 walH 89457..90824 (+) 1368 WP_014481474.1 WalRK two-component regulatory system regulator WalH -
  QMY17_RS00505 walI 90811..91653 (+) 843 WP_014481473.1 WalRK two-component regulatory system regulator WalI -
  QMY17_RS00510 vicX 91675..92469 (+) 795 WP_003226939.1 MBL fold metallo-hydrolase Regulator
  QMY17_RS00515 htrA 92551..93753 (+) 1203 WP_014481472.1 serine protease HtrC Regulator
  QMY17_RS00520 - 93774..93906 (+) 133 Protein_89 hypothetical protein -
  QMY17_RS00525 - 93934..94086 (+) 153 Protein_90 ATP-binding protein -
  QMY17_RS00530 rocR 94068..95453 (-) 1386 WP_003244510.1 arginine utilization regulatory protein RocR -
  QMY17_RS00535 - 95680..95964 (+) 285 WP_015715052.1 autorepressor SdpR family transcription factor -
  QMY17_RS00540 - 95964..96599 (+) 636 WP_014481470.1 SdpI family protein -
  QMY17_RS00545 - 96783..97337 (+) 555 WP_015715050.1 SdpA family antimicrobial peptide system protein -

Sequence

Protein


Download         Length: 264 a.a.        Molecular weight: 29283.28 Da        Isoelectric Point: 5.8036

>NTDB_id=764079 QMY17_RS00510 WP_003226939.1 91675..92469(+) (vicX) [Bacillus subtilis strain N3378-3At]
MSLQFSVLASGSTGNAFYLETEDHAFLVDAGLSGKAMDGLMAQIGRKLDDVDGIFVTHEHSDHIKGLGVVARKYKLPIYA
NEKTWKAMENQIGKIDTDQKFVFPMETVKSFGGLDVESFGVSHDAAEPMFYVFHYNGRKLALMTDTGYVSDRMKGIIRSA
NVFVFESNHDVGMLQMGRYPWSIKRRILSDVGHVSNEDAALAMTDVIGDETSRIYLAHLSQDNNMKELARMSVQQTLASK
GFVTGETFDLYDTDPKKATPLCAV

Nucleotide


Download         Length: 795 bp        

>NTDB_id=764079 QMY17_RS00510 WP_003226939.1 91675..92469(+) (vicX) [Bacillus subtilis strain N3378-3At]
ATGAGCTTGCAATTTAGCGTACTTGCGAGCGGGAGTACGGGAAATGCGTTTTACCTTGAAACAGAGGATCACGCATTTTT
AGTGGACGCCGGTTTGAGCGGGAAAGCCATGGATGGGCTGATGGCGCAGATCGGGCGTAAGCTGGATGATGTAGACGGCA
TTTTTGTGACGCATGAGCATAGTGACCATATTAAGGGCCTTGGTGTGGTCGCCAGAAAGTACAAGCTTCCGATCTATGCG
AATGAGAAGACTTGGAAAGCGATGGAGAATCAAATCGGGAAAATTGACACCGATCAAAAGTTTGTATTTCCGATGGAAAC
AGTGAAGTCGTTCGGCGGACTTGATGTTGAATCATTTGGCGTTTCCCACGATGCGGCCGAGCCGATGTTTTATGTATTCC
ATTATAACGGCCGAAAGCTCGCGTTAATGACAGATACGGGATATGTCAGCGACCGGATGAAAGGCATTATCCGTTCAGCG
AATGTGTTTGTGTTTGAAAGCAATCATGATGTCGGCATGCTGCAAATGGGAAGATACCCGTGGAGCATTAAGCGGCGGAT
TTTAAGTGACGTCGGGCACGTGTCAAATGAAGATGCTGCCTTGGCGATGACGGATGTCATTGGCGATGAGACGTCTCGTA
TTTACCTGGCGCATTTGAGCCAGGACAACAACATGAAGGAGCTGGCAAGAATGTCTGTGCAGCAGACATTGGCTTCTAAA
GGATTTGTGACGGGTGAGACATTTGACTTATACGACACCGATCCGAAGAAGGCCACTCCGCTTTGCGCTGTATAA

Domains

Predicted by InterProScan.

Metallo-beta-lactamase superfamily (Lactamase_B)

(12-218)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vicX Streptococcus mutans UA159

53.435

99.242

0.53