Detailed information NTG0763908

Bioinformatically predicted

Overview

• Name: sepM
• Type: Regulator
• Locus tag: QLQ05_RS15365
• Genome accession: NZ_CP125762
• Coordinates: 2858790..2859815 (-)
• Length: 341 a.a.
• NCBI ID: WP_003245451.1
• Uniprot ID: O34470
• Organism: Bacillus subtilis strain KRS015
• Function: processing of CSP (predicted from homology) Competence regulation

Genomic Context

Location: 2853790..2864815

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
QLQ05_RS15330	-	2854275..2855171 (-)	897	WP_003232206.1	2-dehydropantoate 2-reductase	-
QLQ05_RS15335	ylbP	2855331..2855813 (+)	483	WP_003244940.1	N-acetyltransferase	-
QLQ05_RS15340	gerR	2855870..2856451 (-)	582	WP_003232210.1	sporulation specific transcriptional regulator GerR	-
QLQ05_RS15345	rpmF	2856597..2856776 (-)	180	WP_003154457.1	50S ribosomal protein L32	-
QLQ05_RS15350	ylbN	2856798..2857316 (-)	519	WP_003232214.1	DUF177 domain-containing protein	-
QLQ05_RS15355	-	2857344..2857529 (+)	186	WP_003232215.1	hypothetical protein	-
QLQ05_RS15360	ylbM	2857526..2858773 (+)	1248	WP_003244707.1	nucleotidyltransferase	-
QLQ05_RS15365	sepM	2858790..2859815 (-)	1026	WP_003245451.1	protease DdcP	Regulator
QLQ05_RS15370	ylbK	2859817..2860599 (-)	783	WP_003232221.1	patatin family protein	-
QLQ05_RS15375	spoVV	2860780..2862006 (+)	1227	WP_003245492.1	dipicolinic acid transporter SpoVV	-
QLQ05_RS15380	coaD	2862017..2862502 (-)	486	WP_003245283.1	pantetheine-phosphate adenylyltransferase	-
QLQ05_RS15385	rsmD	2862507..2863061 (-)	555	WP_003232227.1	16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	-
QLQ05_RS15390	ylbG	2863384..2863656 (-)	273	WP_009967171.1	YlbG family protein	-
QLQ05_RS15395	ylbF	2863711..2864160 (-)	450	WP_003221370.1	regulatory iron-sulfur-containing complex subunit RicF	Regulator
QLQ05_RS15400	ylbE	2864276..2864515 (-)	240	WP_003232231.1	YlbE-like family protein	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37651.23 Da
• Isoelectric Point: 6.5347

>NTDB_id=763908 QLQ05_RS15365 WP_003245451.1 2858790..2859815(-) (sepM) [Bacillus subtilis strain KRS015]
MLRKKHFSWMLVILILIAVLSFIKLPYYITKPGEATELASLIKVEGGYPEKGSLSLMTVKVGPANPFTYVWAKMHPYYEI
VPDESIKEEGESDKEYMKRQLQMMKSSQENAVIAAYQKAGKKVSYSFNGIYASSVVENMPAKGKIEVGDKIISADGKNYQ
SAEKLIDYISSKKAGDKVTLKIEREEKEKRVTLTLKQFPDEPDRAGIGVSLYTDRNVKVEPDIDFEIENIGGPSAGLMMS
LEIYNQLTKPDETKGYDIAGTGTIDVDGKVGPIGGIDQKVVAADKAGKDIFFAPNQNGASNSDYKNAVKTAKDIDSNMKI
VPVDTMQDAIDYLNKLKAKST

Nucleotide

• Length: 1026 bp

>NTDB_id=763908 QLQ05_RS15365 WP_003245451.1 2858790..2859815(-) (sepM) [Bacillus subtilis strain KRS015]
TTGCTACGTAAAAAACATTTTAGCTGGATGCTCGTCATCCTCATACTGATCGCCGTTTTATCATTTATAAAACTTCCATA
CTATATTACAAAACCGGGAGAAGCGACAGAGCTTGCTTCATTGATAAAAGTGGAGGGAGGCTACCCGGAAAAAGGAAGTC
TGTCCTTAATGACTGTTAAAGTGGGACCGGCTAATCCATTTACATATGTGTGGGCAAAGATGCACCCTTATTATGAAATT
GTTCCTGATGAGAGCATTAAGGAGGAAGGCGAATCAGATAAGGAGTATATGAAAAGACAGCTCCAAATGATGAAAAGCTC
GCAAGAAAATGCGGTTATAGCCGCCTATCAAAAGGCAGGAAAAAAAGTCAGCTATTCCTTTAACGGCATATACGCAAGCT
CAGTTGTAGAAAACATGCCGGCAAAAGGGAAAATAGAAGTCGGTGATAAAATCATCAGCGCAGACGGCAAAAACTATCAG
TCTGCTGAAAAGCTGATTGATTATATCAGCAGCAAAAAAGCGGGAGATAAAGTCACGTTAAAGATCGAAAGAGAAGAAAA
AGAAAAGCGTGTCACCCTTACGTTAAAACAATTTCCTGATGAGCCGGATCGGGCAGGAATCGGAGTTTCGCTTTATACAG
ACAGAAACGTGAAGGTAGAGCCTGATATTGATTTTGAAATCGAAAATATTGGCGGCCCGTCAGCAGGGTTAATGATGTCC
CTTGAAATCTATAATCAGCTGACAAAACCAGACGAAACAAAAGGCTACGATATTGCGGGAACAGGTACGATTGATGTTGA
CGGAAAAGTAGGCCCGATCGGCGGCATTGATCAAAAAGTCGTCGCCGCAGACAAAGCCGGAAAAGACATTTTCTTCGCGC
CAAATCAAAACGGCGCCAGCAATTCCGATTATAAGAACGCAGTAAAAACAGCAAAAGATATTGATTCAAATATGAAGATT
GTGCCTGTTGATACCATGCAGGATGCGATTGATTATTTGAATAAGCTGAAAGCGAAAAGCACCTGA

Domains

Predicted by InterProScan.

• Lon protease (S16) C-terminal proteolytic domain (Lon_C) (232-331)

• Peptidase family M50 (Peptidase_M50) (59-220)

• PDZ domain (PDZ_2) (128-195)

3D structure

• PDB: 2KJP

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
sepM	Streptococcus mutans UA159	39.143	100	0.402