Detailed information NTG0763856

Bioinformatically predicted

Overview

• Name: clpX
• Type: Regulator
• Locus tag: QLQ05_RS06990
• Genome accession: NZ_CP125762
• Coordinates: 1364313..1365575 (+)
• Length: 420 a.a.
• NCBI ID: WP_003229613.1
• Uniprot ID: A0ABU0V489
• Organism: Bacillus subtilis strain KRS015
• Function: require for competence development (predicted from homology) Competence regulation

Genomic Context

Location: 1359313..1370575

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
QLQ05_RS06970	leuC	1359386..1360804 (+)	1419	WP_003229604.1	3-isopropylmalate dehydratase large subunit	-
QLQ05_RS06975	leuD	1360817..1361416 (+)	600	WP_003229606.1	3-isopropylmalate dehydratase small subunit	-
QLQ05_RS06980	ddcA	1361535..1362539 (+)	1005	WP_003229609.1	DNA damage checkpoint antagonist DdcA	-
QLQ05_RS06985	tig	1362767..1364041 (+)	1275	WP_003229611.1	trigger factor	-
QLQ05_RS06990	clpX	1364313..1365575 (+)	1263	WP_003229613.1	ATP-dependent protease ATP-binding subunit ClpX	Regulator
QLQ05_RS06995	lonB	1365727..1367385 (+)	1659	WP_004398923.1	ATP-dependent protease LonB	-
QLQ05_RS07000	lon	1367566..1369890 (+)	2325	WP_003229618.1	endopeptidase La	-
QLQ05_RS07005	yihA	1369887..1370474 (+)	588	WP_003229621.1	ribosome biogenesis GTP-binding protein YihA/YsxC	-

Sequence

Protein

• Length: 420 a.a.
• Molecular weight: 46350.22 Da
• Isoelectric Point: 4.5879

>NTDB_id=763856 QLQ05_RS06990 WP_003229613.1 1364313..1365575(+) (clpX) [Bacillus subtilis strain KRS015]
MFKFNEEKGQLKCSFCGKTQDQVRKLVAGPGVYICDECIELCTEIVEEELGTEEEVEFKDVPKPQEIREILNEYVIGQDQ
AKKSLAVAVYNHYKRINSNSKVDDVELSKSNISLIGPTGSGKTLLAQTLARILNVPFAIADATSLTEAGYVGEDVENILL
KLIQAADYDVEKAEKGIIYIDEIDKVARKSENPSITRDVSGEGVQQALLKILEGTVASVPPQGGRKHPHQEFIQIDTTNI
LFICGGAFDGIEQIIKRRLGQKVIGFGADNKAADLEKEDLLSKVLPEDLLRFGLIPEFIGRLPVIASLEKLDEEALVAIL
TKPKNALVKQFKKMLELDNVELEFEEEALSEIAKKAIERKTGARGLRSIIEGIMLDVMFELPSRDDIEKCVITGATVTHG
EPPRLLLKDGTEVSQDKTSA

Nucleotide

• Length: 1263 bp

>NTDB_id=763856 QLQ05_RS06990 WP_003229613.1 1364313..1365575(+) (clpX) [Bacillus subtilis strain KRS015]
ATGTTTAAATTTAACGAGGAAAAAGGACAATTAAAATGCTCGTTCTGTGGAAAAACACAAGATCAGGTTCGTAAGCTTGT
AGCTGGACCTGGTGTATATATATGTGACGAATGTATCGAACTCTGCACTGAAATTGTAGAGGAAGAACTCGGAACAGAAG
AAGAAGTAGAATTTAAAGACGTACCAAAGCCTCAGGAAATTCGCGAAATTTTGAATGAATATGTCATCGGCCAAGATCAA
GCGAAGAAATCACTTGCTGTTGCTGTGTATAACCACTATAAGCGCATTAACTCCAACAGCAAAGTTGATGATGTTGAGCT
TTCAAAAAGTAATATTTCATTAATCGGCCCTACGGGAAGCGGTAAAACCCTTCTGGCGCAAACATTGGCTCGCATTTTAA
ATGTGCCGTTTGCGATTGCGGACGCTACATCTTTGACTGAAGCTGGATACGTGGGTGAAGATGTAGAGAATATTCTCTTG
AAGCTCATCCAAGCTGCTGATTATGATGTGGAAAAAGCCGAAAAAGGCATTATCTATATTGATGAAATCGATAAAGTGGC
TAGAAAATCTGAAAACCCGTCTATCACACGTGATGTGTCAGGTGAGGGTGTACAGCAGGCATTGCTTAAAATTCTTGAGG
GTACAGTGGCAAGCGTACCGCCTCAAGGTGGACGTAAGCATCCTCATCAAGAATTCATTCAAATTGACACAACAAATATT
TTGTTCATTTGCGGCGGAGCTTTCGATGGTATCGAACAAATCATCAAACGCCGTTTAGGCCAAAAAGTGATTGGATTCGG
TGCCGACAATAAAGCTGCTGATCTTGAGAAAGAAGATCTTCTTTCAAAAGTGCTTCCAGAAGATTTGCTCCGTTTCGGGT
TAATTCCTGAATTTATCGGACGTCTTCCGGTTATTGCAAGCCTTGAAAAGCTTGACGAAGAAGCATTGGTTGCGATCTTA
ACAAAACCGAAAAACGCTCTTGTTAAGCAATTCAAGAAAATGCTTGAGCTTGACAACGTTGAGCTTGAGTTTGAAGAAGA
AGCGCTTTCTGAAATTGCTAAAAAAGCAATTGAACGCAAGACTGGAGCACGCGGACTCCGTTCTATCATTGAAGGCATCA
TGCTTGATGTGATGTTTGAGCTGCCTTCTCGTGATGACATTGAAAAATGTGTAATCACCGGGGCAACTGTGACACACGGA
GAGCCTCCTCGCCTCTTATTAAAAGACGGCACTGAGGTAAGCCAAGATAAAACATCTGCATAA

Domains

Predicted by InterProScan.

• AAA domain (Cdc48 subfamily) (AAA_2) (109-305)

• C-terminal, D2-small domain, of ClpB protein (ClpB_D2-small) (311-389)

• ClpX C4-type zinc finger (zf-C4_ClpX) (11-48)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpX	Streptococcus mutans UA159	68.01	94.524	0.643
clpX	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	60.506	94.048	0.569